Item | Value |
---|---|
gene id | LOC110498351 |
gene name | LOC106598081 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048583.1 |
NCBI id | CM023237.2 |
chromosome length | 67237266 |
location | 40858672 ~ 40920155 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: lateral signaling target protein 2 homolog isoform X2 |
id | description |
---|---|
K24780 | ZFYVE28, LST2; lateral signaling target protein 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036954812.1 | False | 5387 | mRNA | 0.51 | 14 | 40858672 | 40920154 |
XM_036954813.1 | False | 5379 | mRNA | 0.50 | 14 | 40858672 | 40920155 |
XM_036954814.1 | True | 5289 | mRNA | 0.51 | 13 | 40858672 | 40920155 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110497850 | LOC106598245 | coding | downstream | 955 | 40811439 ~ 40857717 (-) |
LOC110497852 | NA | coding | downstream | 54367 | 40789591 ~ 40804305 (-) |
tdrd9 | LOC106598466 | coding | downstream | 70271 | 40757564 ~ 40788401 (-) |
LOC110498350 | NA | coding | downstream | 159405 | 40689096 ~ 40699267 (-) |
LOC110497845 | LOC106598670 | coding | downstream | 183716 | 40666686 ~ 40674956 (-) |
LOC110497855 | LOC106597482 | coding | upstream | 30801 | 40950956 ~ 40959546 (-) |
LOC110497858 | chmp3 | coding | upstream | 40213 | 40960368 ~ 40965227 (-) |
LOC110497861 | LOC106597151 | coding | upstream | 73848 | 40994003 ~ 41033626 (-) |
LOC110497863 | LOC106596965 | coding | upstream | 132711 | 41052866 ~ 41080347 (-) |
LOC110497865 | LOC106611002 | coding | upstream | 226009 | 41144107 ~ 41162883 (-) |
G1624817 | NA | non-coding | downstream | 177261 | 40681143 ~ 40681411 (-) |
LOC110497844 | LOC106598722 | non-coding | downstream | 231037 | 40619452 ~ 40643379 (-) |
G1624781 | NA | non-coding | downstream | 263583 | 40594832 ~ 40595089 (-) |
G1624780 | NA | non-coding | downstream | 264408 | 40594043 ~ 40594264 (-) |
G1624954 | NA | non-coding | upstream | 49378 | 40969533 ~ 40969797 (-) |
G1624936 | NA | non-coding | upstream | 130151 | 41050306 ~ 41051596 (-) |
G1625032 | NA | non-coding | upstream | 200696 | 41120851 ~ 41122447 (-) |
G1625067 | NA | non-coding | upstream | 276490 | 41196645 ~ 41196974 (-) |
G1625105 | NA | non-coding | upstream | 348664 | 41268819 ~ 41272024 (-) |
G1624737 | NA | other | downstream | 226934 | 40630578 ~ 40631738 (-) |
G1624738 | NA | other | downstream | 228464 | 40629765 ~ 40630208 (-) |
LOC110497838 | trmt5 | other | downstream | 311050 | 40467344 ~ 40547622 (-) |
G1623175 | NA | other | downstream | 1177143 | 39675439 ~ 39681529 (-) |
G1625066 | NA | other | upstream | 274278 | 41194433 ~ 41194759 (-) |
G1625428 | arf6 | other | upstream | 926100 | 41846255 ~ 41850433 (-) |
G1626105 | NA | other | upstream | 1335080 | 42255235 ~ 42255797 (-) |