LOC110497861 (LOC106597151)


Basic Information

Item Value
gene id LOC110497861
gene name LOC106597151
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 40994003 ~ 41033626 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574295.2
AGACATTACAGTATGGCTTTGAAGCTGTGCTGACGTGCTTTTATTTTCTAATGAGGGTGAAAAACTCTGCCCTGTTTGACAGCAAGGTAGCTAGCGGTATGCATAGTTGTTTAGGGGGTACGCGCTAGGGCTACCTAAATGAGCACGActcgagagtgtgtgtgtactgtcagtTAGGGTCCAATTTCGACCAGTCTAGATTGAAGAGAAGACCTCCGCGCAGTCATAACAACTTCAGCTTCAACATCCAGCGGAACGGAGAATGGACAGCTATCAGGCTAGCTAGGTGGCTATCCTTACTAGGACAACGACATTTAGGGAGGAAATGTGCTAGCTAGCTGGTTTGTGTGAGACGACGGTTTCCTGTTTTCCAGGTTGAATCGACAGTAACTGTTAACATCTGGATTAAGAACATACGTTAGGTGAGGTGGAGAGATGCAGACTTTTTTGAAAGGCAGGAGAGTGGGCTACTGGCTCAGcgagaagaagatgaagaagctGAATTTTCAGGCCTTCGCTGATTTGTGCAGGAAAAGAGGAATAGAAGTGGTCCAGCTGGACCTGAGCCAGCCCCTGGAGGAGCAAGGTCCCCTAGATGTTATCATCCACAAGCTGACCGACCTGATCCTGGAGGCCGACCAGAACGACACCCAGTCAGTCCTGCTGGTGCAGAGAGTGCAGGACTACATTGAGGCCCACCCTGAGACCATCGTGCTGGATCCCCTCCCAGCCATCAGGACCCTGCTGGACCGCTGCAAGTCCTACCAGCTCATCCACAGGATAGAGGACTGCATGCAAGATGAGAGAATCTGCTCTCCCCCGTTCATGGTTCTGAACACAGAGTGTGGTCCAGATACACTGGAGAAGATTGAGAAGCATGGACTCACTTTCCCATTTAttTGCAAAACACGAGTAGCCCATGGAACCAACTCCCACGAGATGGCCATCATCTTCAGTGAGGAGGACCTGAAGGATGTGAAGCCTCCGTGTGTGATCCAGAGCTTCATCAACCACAATGCGGTGCTCTACAAGGTGTTTGTGGTGGGGGAGTCCTACACACTGGTGGAGAGACCATCCCTCAAGAACTTCCCCGCTGGACCAGCAGACAGAAAAGCAATTTTCTTCAACAGTCATAATGTATCAAAGCCAGAGTCCTCTTCAGACCTGACTTCTAGGGACAACGTGGAGGGGGTGTCCCAGCCACCCAGTGATGATGTCATCAGAGAGCTGTCCAGGTCCTTGCGACAGGCGCTGGGCGTGTCCTTGTTTGGCATCGACGTCATCATCAACAACCTCACGGGCCAACACGCCGTCATCGACATCAATGCATTCCCTGGTTACGAGGGTGTACCAGAGTTCTTCAACGACCTCCTGACCCACATCACCAGTGTGCTTCAGGCTCACTCCCCCGACAGCCCCCCAGCCAGCGGGCAGCCCAAAAGCCTGGCATCCAGCCATACCCCCATCGCTACGGTGCCCACAGCCCCGACCCCGGACTCCCCAGGCTGCTGCAGCATGCTGGGGAAGGACGCCAGCAGCAGCCCCTGGATCGTGGAGGGGGATGGGAACCTGAAGGGCCCCCGCCAGAGACTGGGCTGTAACTCAGCCATGTCCCCCAACTTCCAGCAACACTGTGTGTCCACGATAGCCACCAAGGCTTCCTCCCAATGACTGCCATCCTCTTCCCCCTTAGCCCCCACCCTGTTCTAACCGCGAACAAAAACAGATGATGATAATGGTGACGATAAtgaataataatcataataattatGATATTAagtataatatatctgtaatCTAAAACCAACTTTTTCTATGTAGATCTTGATGGTGATTGGGTCTTTGATCTTTTCTTTTCTGccttttggattttttttgtttggtTTAATAAGACTTACAGTAATGTGAACTTTTGGGAACTCCGCTTGCTTAGTTGCTGATTTAGTTTCTCTCTGTGAAATCTCTGTAATCAAGTGGTCCACATGAGGTGGTTGGGGGACTAGCCATGTCTGACCTTTGACTGCAGCAGTAAAGAAAAGGGCAATTAAACATATGCTCCAGGCACACAGGCACGTTCACACATTTCCTGCATTTAAACTCACTAGTGATGTGTGTCTGAATGCCACTCTGTCGTGTGTGGTTAGGGTAGAAGGGATGTATGGCTAGAGGATTGTCTGTATTCTAATACTCCTCCACTGGTTTGGACCAGCTGCCTGTGTTAACTGACTTAAAGCGGAAGAGCCCACTCTGTTGCAAGAAAGTCATGGGATCTTGGTGGACATTAGATTAGGGCGATATCTATCGTCTTTTAAGGTATACCGGTATGGATCCTCATACCAGTATGGATTTTTACAAAACCGTCTAACACGTCAAACTCATGCTACGGAGgaccgagtgtctgcaggtttttgctcTTCCCTTTTACTTGATTGAtaaattaaggtcactaattagtagtggggtggcaggtagcctagtggttagagcgttggatcagtaaccgaaaggttgctggattgaatcccagagctgaccaggtaaaaaatctgtcattctgcgcCTGAGCAGAGCTGTTAATTCACTGTTCCCCAGACgccaaagacgtggatgttgattaaggcagccccccaccccccccgcacctttctgattcagaggagttgggttaaatgcggaagacacatttcagttgaagacattcagttgtacaactgactaggtatccccctttcaccttgtgaggaactcccctcacctggttttctaggtcttaattgaaaggaaaaaccaaaaaccGGCAGACATttggccctctgtggaatgagtttgacaccgaAGGTCTATAACGAGCTGTTGATACAGTGCTATATAAATGAAAAGCTGGGACTACTTCACTATCAGTGTTGCCCTAGTTTGGTTGTGTATATAACAATCAGCATGGAGAAATGTTTTTGTTGGTTGCAATCCTAGGGTCATGCACTACTCATAAAACATATTCAGAACTTTCATTATTCAGACTAAAATTCAACTAAAATTATGCCAAATACCGCCATAGCATCAAAATGGGGAAAGATATTGTGATAATATATATTGGCCAAGTTGCCCAGCCCTACATTAGATACAATTTCAATTGAACGCTGTTTACTTTCTTGTGTGCCATCTTATTGGCAAGGCTCTTGTCATGTCAATTTCATAGTCttcacaactacagaaaacacaaaatattttCTATCAAGATGTATGTAGCACGAAAGTCTGAGAATGCCTGAATAATCCTTTTGATCACACCTGATTTATAAACATTTGTCAGCAGTAAAAGGGGAAAAAATAAATCTCTTCATGTGACCAAGTTAAATATGGAATGTTTATAAAGGCCTTTGAGTGTTTATGTCAGATGTGGTTGAGGTTTATACAGGTGTTTTATGCAAGTACTAAGAAGTCCATGTCCCTGCTTCTCAACTTGATTTGCGTTCCTCCAGCTGAAAGATGAGGATCACATTCCGTTTGTATATGTGGGTGTTTTCGAGAAGAATTCCAATGCTTTAGTGAAAATAACCTGACTGTCACACAGTACTGTTTTATGGACTTGAAATGACTGGACACAGGAAACTCTCCCTCCATTACGACTCAATGGAACAGTATGTTCAATTGGTATTGAACACACTAAATCGGCAAGTTTATTTTTGTGACCATTAAATTAATTGTTCTTGATTACAATGCTAAggatatttttgtttgtttttactttCAGCCTTATTGACAGCAGACTCCTGCACCTATTAAACAGTGAAACACCCTGTAGTCCACCTGCTGCGCTCTCTTGTATAGCTGGTATCGACAGACGCCAAACTCCCTGTATGAATCCTATTGTCCAGCTGCTGTCCTTTTGAGGTGGCACAAAATAAGAGAGAACATCTAATTTGCTCCTAATGTTCACTGTGAGAGAACCATTTAGTTTTTACTTCTATttgactgaaatgtaaatgttAACATCTTTGTCATGATTTCCTAAGAACAATTTATTTAGCGATTTTATGGggggaaattatttttttattaaatggaGTGAGCAAGTTGAACAAACAATGGATGTTTGTCAGACGAGTAGTGAAATAGTTAGTTTCATTTGCCAACCAACTTCAGAACTTCGAGACCAAGCAGCTTAGTTGCCACTGTCGTCACCCTTAGTAAGCATCCAGTTGAAGTGCAAGGAAAAGAGTACAGGGCTGCCAACTCAATGTAAAAACAATAGGGCATTTACTTGAGCACAGGCTCTTAGTCCTTCAGCATGTACGTAGAATAAGTAGGCTAGCAAATTGAATCGACACAGAGGTTACTTAGCCCCAATGGCCTAGTGACAATGACTGACAATCTAAACCGTTTAGCCATTCCACCTGCAGCCCTCCGGGACTAGCGTTGAGTAGCAATGCTCCTAAAGCCTTTCCTAGTGAAGACACAGATCCTCAACCCTGTAAACAGTGACAAAGGAGAGGATGTCTTAACCAAGCCATGCCCAGTATGTTGTgaaaacactgacatttctgtacACAACTATACTGTGTCTCACATTGTTTTTCATTGTGCTTCTAAATGGGAAATAAATATTACCCCTACTTACAA
>XM_021574296.2
AGACATTACAGTATGGCTTTGAAGCTGTGCTGACGTGCTTTTATTTTCTAATGAGGGTGAAAAACTCTGCCCTGTTTGACAGCAAGGTAGCTAGCGGTATGCATAGTTGTTTAGGGGGTACGCGCTAGGGCTACCTAAATGAGCACGActcgagagtgtgtgtgtactgtcagtTAGGGTCCAATTTCGACCAGTCTAGATTGAAGAGAAGACCTCCGCGCAGTCATAACAACTTCAGCTTCAACATCCAGCGGAACGGAGAATGGACAGCTATCAGGCTAGCTAGGTTTGTGTGAGACGACGGTTTCCTGTTTTCCAGGTTGAATCGACAGTAACTGTTAACATCTGGATTAAGAACATACGTTAGGTGAGGTGGAGAGATGCAGACTTTTTTGAAAGGCAGGAGAGTGGGCTACTGGCTCAGcgagaagaagatgaagaagctGAATTTTCAGGCCTTCGCTGATTTGTGCAGGAAAAGAGGAATAGAAGTGGTCCAGCTGGACCTGAGCCAGCCCCTGGAGGAGCAAGGTCCCCTAGATGTTATCATCCACAAGCTGACCGACCTGATCCTGGAGGCCGACCAGAACGACACCCAGTCAGTCCTGCTGGTGCAGAGAGTGCAGGACTACATTGAGGCCCACCCTGAGACCATCGTGCTGGATCCCCTCCCAGCCATCAGGACCCTGCTGGACCGCTGCAAGTCCTACCAGCTCATCCACAGGATAGAGGACTGCATGCAAGATGAGAGAATCTGCTCTCCCCCGTTCATGGTTCTGAACACAGAGTGTGGTCCAGATACACTGGAGAAGATTGAGAAGCATGGACTCACTTTCCCATTTAttTGCAAAACACGAGTAGCCCATGGAACCAACTCCCACGAGATGGCCATCATCTTCAGTGAGGAGGACCTGAAGGATGTGAAGCCTCCGTGTGTGATCCAGAGCTTCATCAACCACAATGCGGTGCTCTACAAGGTGTTTGTGGTGGGGGAGTCCTACACACTGGTGGAGAGACCATCCCTCAAGAACTTCCCCGCTGGACCAGCAGACAGAAAAGCAATTTTCTTCAACAGTCATAATGTATCAAAGCCAGAGTCCTCTTCAGACCTGACTTCTAGGGACAACGTGGAGGGGGTGTCCCAGCCACCCAGTGATGATGTCATCAGAGAGCTGTCCAGGTCCTTGCGACAGGCGCTGGGCGTGTCCTTGTTTGGCATCGACGTCATCATCAACAACCTCACGGGCCAACACGCCGTCATCGACATCAATGCATTCCCTGGTTACGAGGGTGTACCAGAGTTCTTCAACGACCTCCTGACCCACATCACCAGTGTGCTTCAGGCTCACTCCCCCGACAGCCCCCCAGCCAGCGGGCAGCCCAAAAGCCTGGCATCCAGCCATACCCCCATCGCTACGGTGCCCACAGCCCCGACCCCGGACTCCCCAGGCTGCTGCAGCATGCTGGGGAAGGACGCCAGCAGCAGCCCCTGGATCGTGGAGGGGGATGGGAACCTGAAGGGCCCCCGCCAGAGACTGGGCTGTAACTCAGCCATGTCCCCCAACTTCCAGCAACACTGTGTGTCCACGATAGCCACCAAGGCTTCCTCCCAATGACTGCCATCCTCTTCCCCCTTAGCCCCCACCCTGTTCTAACCGCGAACAAAAACAGATGATGATAATGGTGACGATAAtgaataataatcataataattatGATATTAagtataatatatctgtaatCTAAAACCAACTTTTTCTATGTAGATCTTGATGGTGATTGGGTCTTTGATCTTTTCTTTTCTGccttttggattttttttgtttggtTTAATAAGACTTACAGTAATGTGAACTTTTGGGAACTCCGCTTGCTTAGTTGCTGATTTAGTTTCTCTCTGTGAAATCTCTGTAATCAAGTGGTCCACATGAGGTGGTTGGGGGACTAGCCATGTCTGACCTTTGACTGCAGCAGTAAAGAAAAGGGCAATTAAACATATGCTCCAGGCACACAGGCACGTTCACACATTTCCTGCATTTAAACTCACTAGTGATGTGTGTCTGAATGCCACTCTGTCGTGTGTGGTTAGGGTAGAAGGGATGTATGGCTAGAGGATTGTCTGTATTCTAATACTCCTCCACTGGTTTGGACCAGCTGCCTGTGTTAACTGACTTAAAGCGGAAGAGCCCACTCTGTTGCAAGAAAGTCATGGGATCTTGGTGGACATTAGATTAGGGCGATATCTATCGTCTTTTAAGGTATACCGGTATGGATCCTCATACCAGTATGGATTTTTACAAAACCGTCTAACACGTCAAACTCATGCTACGGAGgaccgagtgtctgcaggtttttgctcTTCCCTTTTACTTGATTGAtaaattaaggtcactaattagtagtggggtggcaggtagcctagtggttagagcgttggatcagtaaccgaaaggttgctggattgaatcccagagctgaccaggtaaaaaatctgtcattctgcgcCTGAGCAGAGCTGTTAATTCACTGTTCCCCAGACgccaaagacgtggatgttgattaaggcagccccccaccccccccgcacctttctgattcagaggagttgggttaaatgcggaagacacatttcagttgaagacattcagttgtacaactgactaggtatccccctttcaccttgtgaggaactcccctcacctggttttctaggtcttaattgaaaggaaaaaccaaaaaccGGCAGACATttggccctctgtggaatgagtttgacaccgaAGGTCTATAACGAGCTGTTGATACAGTGCTATATAAATGAAAAGCTGGGACTACTTCACTATCAGTGTTGCCCTAGTTTGGTTGTGTATATAACAATCAGCATGGAGAAATGTTTTTGTTGGTTGCAATCCTAGGGTCATGCACTACTCATAAAACATATTCAGAACTTTCATTATTCAGACTAAAATTCAACTAAAATTATGCCAAATACCGCCATAGCATCAAAATGGGGAAAGATATTGTGATAATATATATTGGCCAAGTTGCCCAGCCCTACATTAGATACAATTTCAATTGAACGCTGTTTACTTTCTTGTGTGCCATCTTATTGGCAAGGCTCTTGTCATGTCAATTTCATAGTCttcacaactacagaaaacacaaaatattttCTATCAAGATGTATGTAGCACGAAAGTCTGAGAATGCCTGAATAATCCTTTTGATCACACCTGATTTATAAACATTTGTCAGCAGTAAAAGGGGAAAAAATAAATCTCTTCATGTGACCAAGTTAAATATGGAATGTTTATAAAGGCCTTTGAGTGTTTATGTCAGATGTGGTTGAGGTTTATACAGGTGTTTTATGCAAGTACTAAGAAGTCCATGTCCCTGCTTCTCAACTTGATTTGCGTTCCTCCAGCTGAAAGATGAGGATCACATTCCGTTTGTATATGTGGGTGTTTTCGAGAAGAATTCCAATGCTTTAGTGAAAATAACCTGACTGTCACACAGTACTGTTTTATGGACTTGAAATGACTGGACACAGGAAACTCTCCCTCCATTACGACTCAATGGAACAGTATGTTCAATTGGTATTGAACACACTAAATCGGCAAGTTTATTTTTGTGACCATTAAATTAATTGTTCTTGATTACAATGCTAAggatatttttgtttgtttttactttCAGCCTTATTGACAGCAGACTCCTGCACCTATTAAACAGTGAAACACCCTGTAGTCCACCTGCTGCGCTCTCTTGTATAGCTGGTATCGACAGACGCCAAACTCCCTGTATGAATCCTATTGTCCAGCTGCTGTCCTTTTGAGGTGGCACAAAATAAGAGAGAACATCTAATTTGCTCCTAATGTTCACTGTGAGAGAACCATTTAGTTTTTACTTCTATttgactgaaatgtaaatgttAACATCTTTGTCATGATTTCCTAAGAACAATTTATTTAGCGATTTTATGGggggaaattatttttttattaaatggaGTGAGCAAGTTGAACAAACAATGGATGTTTGTCAGACGAGTAGTGAAATAGTTAGTTTCATTTGCCAACCAACTTCAGAACTTCGAGACCAAGCAGCTTAGTTGCCACTGTCGTCACCCTTAGTAAGCATCCAGTTGAAGTGCAAGGAAAAGAGTACAGGGCTGCCAACTCAATGTAAAAACAATAGGGCATTTACTTGAGCACAGGCTCTTAGTCCTTCAGCATGTACGTAGAATAAGTAGGCTAGCAAATTGAATCGACACAGAGGTTACTTAGCCCCAATGGCCTAGTGACAATGACTGACAATCTAAACCGTTTAGCCATTCCACCTGCAGCCCTCCGGGACTAGCGTTGAGTAGCAATGCTCCTAAAGCCTTTCCTAGTGAAGACACAGATCCTCAACCCTGTAAACAGTGACAAAGGAGAGGATGTCTTAACCAAGCCATGCCCAGTATGTTGTgaaaacactgacatttctgtacACAACTATACTGTGTCTCACATTGTTTTTCATTGTGCTTCTAAATGGGAAATAAATATTACCCCTACTTACAA

Function

NR:

description
inositol-tetrakisphosphate 1-kinase-like

GO: NA

KEGG:

id description
K00913 ITPK1; inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574295.2 False 4620 mRNA 0.45 11 40994003 41033626
XM_021574296.2 True 4565 mRNA 0.45 11 40994003 41033626
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110497858 chmp3 coding downstream 28776 40960368 ~ 40965227 (-)
LOC110497855 LOC106597482 coding downstream 34457 40950956 ~ 40959546 (-)
LOC110498351 LOC106598081 coding downstream 73848 40858672 ~ 40920155 (-)
LOC110497850 LOC106598245 coding downstream 136286 40811439 ~ 40857717 (-)
LOC110497852 NA coding downstream 189698 40789591 ~ 40804305 (-)
LOC110497863 LOC106596965 coding upstream 19240 41052866 ~ 41080347 (-)
LOC110497865 LOC106611002 coding upstream 112538 41144107 ~ 41162883 (-)
LOC110497867 LOC106596550 coding upstream 139407 41173033 ~ 41189809 (-)
LOC110497872 LOC106596263 coding upstream 166219 41199845 ~ 41204084 (-)
LOC110497873 LOC106596382 coding upstream 170608 41204234 ~ 41211621 (-)
G1624954 NA non-coding downstream 24206 40969533 ~ 40969797 (-)
G1624923 NA non-coding downstream 88641 40904638 ~ 40905362 (-)
LOC110498350 NA non-coding downstream 296294 40689096 ~ 40699267 (-)
G1624817 NA non-coding downstream 312592 40681143 ~ 40681411 (-)
LOC110497844 LOC106598722 non-coding downstream 366368 40619452 ~ 40643379 (-)
G1624936 NA non-coding upstream 16680 41050306 ~ 41051596 (-)
G1625032 NA non-coding upstream 87225 41120851 ~ 41122447 (-)
G1625067 NA non-coding upstream 163019 41196645 ~ 41196974 (-)
G1625105 NA non-coding upstream 235193 41268819 ~ 41272024 (-)
G1625092 NA non-coding upstream 266511 41300137 ~ 41300971 (-)
G1624737 NA other downstream 362265 40630578 ~ 40631738 (-)
G1624738 NA other downstream 363795 40629765 ~ 40630208 (-)
LOC110497838 trmt5 other downstream 446381 40467344 ~ 40547622 (-)
G1623175 NA other downstream 1312474 39675439 ~ 39681529 (-)
G1625066 NA other upstream 160807 41194433 ~ 41194759 (-)
G1625428 arf6 other upstream 812629 41846255 ~ 41850433 (-)
G1626105 NA other upstream 1221609 42255235 ~ 42255797 (-)

Expression

LOC110497861(LOC106597151) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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LOC110497861(LOC106597151) Expression in each Bioproject

Bar chart with 21 bars.
LOC110497861(LOC106597151) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
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Co-expression Network