LOC110497863 (LOC106596965)


Basic Information

Item Value
gene id LOC110497863
gene name LOC106596965
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 41052866 ~ 41080347 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574300.2
CGCAAGCTGACAATTCCAGATTCGAACCAGTCAGCAAACAGCGTCTGGATAGGCCACACCACCCAACCAGGCGCCGAGCAAAGATGAGTGTTTTTAAGGAAAATCAATCCAAGCTAAGGAACACGTCTTGAGTTTCTATTCTCGGAAAAGGGacttgcaatttgctgaaaagtCGAGGCAAAGTGGATCTAAAGGCACATGTAGGATTCTCTCTGTGTATTTGGCGTCGATTTATGCTTAATGATCGGTGTTACAAAGGGGAGTTGTGCCGTAGGTTAAGACAATTTTTTTTCTACAAGGAAATCATCACAACTTCATTCGGGAATCCACTTAAAAGGGAGAATAATTTCTGAAAGAAGCTAAGTCTGCTCAAGGCATGGCAGGTTGGGCGTGGGTGTCAGAGGAGGCTCCAGAGGACCCGGCCCTGAGAGAGGGAGCCGATGGCTGAGGAATGAAGTGCTTCGCCCGGGCAGAATGAAGATGCAGGAGGGGAGATCCCAGAACAACAAGTGAAGAAGAGTCACAATGGGTGCCAATGCATCCAGCTACTCGCACTCATGCTCCCCTCGTATAGGAGGAAACGCACAGATACAGCAGACCTTCATAGGGACGTCGTCATACTCCCAGCAGGGCTATGGCTGGGAGTCCAAGCTGTACAGCCTGGAGCAGGGTCACGACAAGCCCCATGACAGGAAGAAGAAGAGCCTGGGCCTGGCCACCCTCAAGAGGAGGTTCATCAAGCGCCGTAAGTCCAGCCGTTCTGCGGACCATGCCCGCCAGATGAAGGAGCTCCTGTCGGGGTGGGATGTGCGTGATGCCAACGCCCTGGTGGAGGAGTATGAGGGCACAGCCTCCCTCAAGGAGCTGAGCTTCCATGCCAGCTTGGCGCGGGCCAAGGCACCCAGCCTGCAGCGTGACCTGGCTGCCCTTTACCAGCACAAGTACTGCACCGACGTGGACCTCATCTTCCAGGACACCTGTTTCCCCGCCCACCGCGCCGTGCTGGCTTCCCGCTGCCCCTTCTTCAAGACCCTACTGTCCTCCTCTCCGGGGTATGGAGCTGAGGTCCTTATGGACATTGAGACGGCGGGTATCGATGTGCCCATGTTCTCTGCACTACTGCACTACCTGTACACGGGGGAGTTTGGGGTGGGTGGGGTGGAGGACTCCAGGCTGCAGAACGTGGACGTGCTGGTGCAGCTGAGTGAGGAGTTCGGCACGCCCAACTCCCTGGAGGCAGACATGAGAGGGCTGTTTGACTACATGTGTTACTACGACGCCCTGCTCAGCTTCTCCTCCGATGCGGAGCTGGTGGAGGCCTACAGCAGTGGGGGGGCTGGAGGGGGCGTGGCCACAGGAGGCTGCCGGGGGCTGAGTTCCCCAGACAAGGACCTGAGGGCCCACAAGGCCGTGCTCTCGGCCCGCTCACCCTTTTTCCGGAACCTTCTGCAGCGGCGCATCCGCACAGGGGAGGAGATGACGGAGCGCACGCTGCAGACACCCACACGCATCGTGCTGGACGAGTCCATCATCCCGCGGAAGTACGTGCGAGTCATCCTTCACTGCATGTACACGGATGCGGTAGAGCTGGGGCTGGTGCTGAGGGGGAGCCCCTCGGCCGGGAGCCTGGGGGAGGTGCAGGTCCTGGTGGCCGGGGGCAGGGGAGGAGCTAGCACCCGCACTGAGGAGGCCATGGAGCTCTACCACATCGCGCTCTTCCTTGAGTTCAGCATGCTGGCACAAGGCTGTGAGGACATTGTGGTGGAGAGCCTGTCCCTGGACTGCCTGGTTCCCATCCTGAAATGGAGCTCTCAGCCCTACGGCTCTAAGTGGGTCCACCGCCAGGCCCtacacttcctgtgtgaggagtTCAGCCAGGTCGTGACCTCTGACGTACTCTACGAGCTCAGCAAGGAGCACCTGCTCACCGCTATCCAGTCAGACTACCTACAGgcGAGTGAGCAGGACATTCTCAAGTACGTTGTGAAGTGGGGCGAGCAGCAGCTTATTAAGAGGATGGCAGACCGGGAGCCTAACGTGCTGAGCGGAACAGCCCACAGCGTGAACAAGCGGGGGGTGAAGAGGAAGGACCTGGATGTGGAGGAGCTGAAGGAGATCCTGTCCCCCCTGCTTCCCTTCATCCGCACTGAGCACATCCTCCCTGCCAACAGCGACGTCCTCTCTGACGCGACCAAGAGGGGTCTGATCAGCACCCCTCCCTCGGACATGCTGCCCACGACTGAGGGGGGCAAGGCCAACTCGTGGTTACGGCAGAAGAACGCTGGCATCTATGTGCGACCACGTCTCTTCTCTCCATACGTGGAGGAGGCCAAGTCTGTGCTGGATGAGATGATGGTGGAACAGACAGATCTGGTGCGTCTACGTTTGGTGCGCATGTCCAACGTGCCAGACACCCTCTACATGGTCAACAACGCCGTGCCACAGTGCTGTCACATGATCAACCATCAGCAGATGGCCAGCAGCCAGACCACCGCTCCGTCCGTGGTAGCCAATGAGATCCCAGTACCCAGACTGCCGGTGGTTAAGGAGATGGTCCAGAGGCTGCAGGAGCTGAGTCACACCGACCAGGTCCAGAGGGCCTACGCCCTCAACTGTGGCGAGGGGCCCACCGTCAGCTATGAGCTGCAGCTGCGTGTGCTGAGGGAGTTTGGCCTGGCGGACGGGGCTACTGAGCTACTGCAGAACCCTTACAAGTTCTTCCCAGAGGAGCGTTTTGGAGACGAGAGTCCTGTTCTGGCCCTGCGCCAGGCAGGTCGTTGTCGGGTCAACAGCAGCCCAGCGATGGACAGCATGTTCTCAGACCTGGAGGGCCTGGCTGGGTTTCACCCCCCACTGCCTCCCCCACCACCCCCATACCACCCCCCTGCCACCCCCAGCCGTGCCCAGCTAAAGGGGGCCTGGAGGCCTCGTGTGCCCATCCCACCCCCCACCCGCTCTTTCTCCTACCCCTGTAACCACACTCTTCTCCAGCTCCACACCACAGCCAAACATGGCAGCCCAGactacccctccacccccagGCCTCCACCTCCAGACTGCAGCAACCCCCAGGCCAAGGGCCGAGCCCTGCTCCCAGAACCACAGctgaGCATGGAGCCTGTGATGAGGGAGTTCATGCCTGACATCGCTCTGGGTGTCTCTGTAATGACCCTGAGGGAGCACCATATGGGGGACAGGGACGGTCACGAACTTCATGGCCCCATGGCACACCCGGCCCCACACCTCCCCCCCGGCCCCTGTCCCTCCACTCGCCTCAGCCTCAGTCATGGTCACTCCTGCAAGAGGCACGCTCCAGAGCCAAAGCTGGAGGCCCAGGCAGAGTTCCCTGATCTGTATGACTTCTCCTGCCGAACAACCACCGCAACATCCAGCCACCCCCTGCCCCCCTATGCAGGGCCAGACCTCTACAGCCACAGCTCCTCCAGCCACCCTCCCTCCTACATGTCTGACAGCCAGGGACGGGCAGCTGAGGCACGCTCTGACCCCCTGCGCCTGGACGTCCTAGGCCTGCCCCCCCAGTGGCAGGATGGAGCTCTGGCTAATCCCTCTGGTCCCCAGGCTGGGGAAGGACACATCCCCAGAGGACGATCAAACAATGAGACCGACCTTACTCACGGTCTTGGCAACTTGTGTGGCTCCCCCAGTGGAAACCTAGACGGGTATGAGGAGCGGTCATCAGCCCACAGGGAAGGCCCGAAGGAGATGGCGGTTACTGGCGAGTCCCCAGGTTCAGGGGCCCAGCAGCCACATAGGAACAGTATTAGCGAGGAGGCTAGCAGAGAACGCAGGTCACCCACCAACCCTGACTACCCTTACAAGAAGTCTGCACTATAACCCTCGGGGAGGACCTGGGGTTGAGTCGTCAAAAGGGAAAGTGAGGGAAACAACCCTCTGTCATGGACAGCAAAGCACTAATGAGTGTGTGTGAAGGGGTGGCTaatgatttttatttattgtgtgtgtgtgtgtaagtaccCTACCTCCTCCAGGCCTTTCTCCATGACATAGTGCTGTCTTCACCTCACGTCTCCTCTGAGTGCTACAGATAAGCAGCATCAGGACTGTAGGTTAGTTGGAGAAACAGCAGTGACTGTCAGACTGTTGTATTGAAGCTTGGTGAAGCCAACCTCAATGCTGCAGTTTTACAATATAACTCCAGCAGTACTGTTTGGGAGGGGCTTTGCCTATTTCCCTTGAGCCTTGTTGCACCACAGGTTTGTTGTGACCTCAAAGTTGTGGGAATCAGGAACAAAGATGTTATCATAAAGAAGATCATAACAAAGACGTTACTATGATCGTCAACCATGAAATGTAGTTCAGATGTGCTGAGGAGGTATAATATACATATGGACTGTAGTCCTCAGGATATATTTTAACTGGGAGATGTATAAATAGGATCTCAGTATAAACTAGTTAACACCAGCACATAGCTTCAATCAGCGTTATCTTCATGATAAAATCGTGTAAAAACATTTTCTTGCTCCTCTCATTTGTATTCCCTCTCTCTGCATTCCTCCAGTACGTACCTCACCTGACAGGTTACATTTGATTTCCCCTTTTTGGTGCTGCATGTTACACAGAAATGCTGATGAGTAGTAGGCTCAGGCTAGTTCAGATCAGGCAGGAAGTAGGTCTGTTGAGGTCCTGTAGGTCTGTCATTGTGCTGCCTCTTCAGTCTCTGaaatacagagcattcagaatgtattcagcccccttgactttttccacatgttgttatgttacaggcttattctaaaattgattaaatagattttttccccttgtcaatctacacacaataacccataatgacaaagcaaaaacaaatattt
>TU1859437
TGTTACAAAGGGGAGTTGTGCCGTAGGTTAAGACAATTTTTTTTCTACAAGGAAATCATCACAACTTCATTCGGGAATCCACTTAAAAGGGAGAATAATTTCTGAAAGAAGCTAAGTCTGCTCAAGGCATGGCAGGTTGGGCGTGGGTGTCAGAGGAGGCTCCAGAGGACCCGGCCCTGAGAGAGGGAGCCGATGGCTGAGGAATGAAGTGCTTCGCCCGGGCAGAATGAAGATGCAGGAGGGGAGATCCCAGAACAACAAGTGAAGAAGAGTCACAATGGGTGCCAATGCATCCAGCTACTCGCACTCATGCTCCCCTCGTATAGGAGGAAACGCACAGATACAGCAGACCTTCATAGGGACGTCGTCATACTCCCAGCAGGGCTATGGCTGGGAGTCCAAGCTGTACAGCCTGGAGCAGGGTCACGACAAGCCCCATGACAGGAAGAAGAAGAGCCTGGGCCTGGCCACCCTCAAGAGGAGGTTCATCAAGCGCCGTAAGTCCAGCCGTTCTGCGGACCATGCCCGCCAGATGAAGGAGCTCCTGTCGGGGTGGGATGTGCGTGATGCCAACGCCCTGGTGGAGGAGTATGAGGGCACAGCCTCCCTCAAGGAGCTGAGCTTCCATGCCAGCTTGGCGCGGGCCAAGGCACCCAGCCTGCAGCGTGACCTGGCTGCCCTTTACCAGCACAAGTACTGCACCGACGTGGACCTCATCTTCCAGGACACCTGTTTCCCCGCCCACCGCGCCGTGCTGGCTTCCCGCTGCCCCTTCTTCAAGACCCTACTGTCCTCCTCTCCGGGGTATGGAGCTGAGGTCCTTATGGACATTGAGACGGCGGGTATCGATGTGCCCATGTTCTCTG

Function

NR:

description
BTB/POZ domain-containing protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574300.2 False 4853 mRNA 0.56 11 41052866 41080347
TU1859437 True 866 TUCP 0.57 3 41069763 41080099

Neighbor

gene id symbol gene type direction distance location
LOC110497861 LOC106597151 coding downstream 19240 40994003 ~ 41033626 (-)
LOC110497858 chmp3 coding downstream 87639 40960368 ~ 40965227 (-)
LOC110497855 LOC106597482 coding downstream 93320 40950956 ~ 40959546 (-)
LOC110498351 LOC106598081 coding downstream 132711 40858672 ~ 40920155 (-)
LOC110497850 LOC106598245 coding downstream 195149 40811439 ~ 40857717 (-)
LOC110497865 LOC106611002 coding upstream 65817 41144107 ~ 41162883 (-)
LOC110497867 LOC106596550 coding upstream 92686 41173033 ~ 41189809 (-)
LOC110497872 LOC106596263 coding upstream 119498 41199845 ~ 41204084 (-)
LOC110497873 LOC106596382 coding upstream 123887 41204234 ~ 41211621 (-)
c19h14orf180 LOC106595839 coding upstream 207035 41287382 ~ 41304570 (-)
G1624936 NA non-coding downstream 1270 41050306 ~ 41051596 (-)
G1624954 NA non-coding downstream 83069 40969533 ~ 40969797 (-)
G1624923 NA non-coding downstream 147504 40904638 ~ 40905362 (-)
LOC110498350 NA non-coding downstream 355157 40689096 ~ 40699267 (-)
G1624817 NA non-coding downstream 371455 40681143 ~ 40681411 (-)
G1625032 NA non-coding upstream 40504 41120851 ~ 41122447 (-)
G1625067 NA non-coding upstream 116298 41196645 ~ 41196974 (-)
G1625105 NA non-coding upstream 188472 41268819 ~ 41272024 (-)
G1625092 NA non-coding upstream 219790 41300137 ~ 41300971 (-)
G1625118 NA non-coding upstream 228888 41309235 ~ 41309456 (-)
G1624737 NA other downstream 421128 40630578 ~ 40631738 (-)
G1624738 NA other downstream 422658 40629765 ~ 40630208 (-)
LOC110497838 trmt5 other downstream 505244 40467344 ~ 40547622 (-)
G1623175 NA other downstream 1371337 39675439 ~ 39681529 (-)
G1625066 NA other upstream 114086 41194433 ~ 41194759 (-)
G1625428 arf6 other upstream 765908 41846255 ~ 41850433 (-)
G1626105 NA other upstream 1174888 42255235 ~ 42255797 (-)
LOC110498355 atg2b other upstream 1385478 42465705 ~ 42480874 (-)

Expression


Co-expression Network