LOC110498590 (LOC106595288)


Basic Information

Item Value
gene id LOC110498590
gene name LOC106595288
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 41745407 ~ 41765102 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953821.1
ATGGTGTACCATGATGAAGTGCTCTCACCCCCAGGCCCTAATGTGTTTGTGAAGGCCCTGCGAAAGCTTCCCAACCTCCATGATGAGCAGTATGCCCTGGACGACAGCATAGGTGGCCCACAGGAGAACACCCTTGTCCTGCCGCTGTGCAAACAAAATAAGAGGATAGTGTACACTGTTTTAGAGTACAGCCCCTTGCTGGACTCTTGCAATATGACCACAGATGACTGGGCTACAATTGGGAAGGACATTGAGAAACACTATGAGAAGTATGACGGTTTTGTTATTCTCCACGGCACGGACACCATGGCCTACACAGCATCCGCTCTGTCCTTCATGTGTGAGAATCTGGGGAAGCCTGTCATCCTCACCGGCTCCCAGGTGCCGATCTATGAGATGAGGAACGATGGAAGAGACAACCTGTTGGGGGCGCTGCTGATCGCTGGTCAGTTTGTCATTCCTGAGGTTTGTCTGTATTTCCACAACAAGCTGTACCGGGGCAACCGTGTGACCAAGGTGGATTCTGGGAGTTTCAATGCCTTCAATTCTCCTAACCTGGCTCCTCTGGCCAATGCTGAAGTGGATATTAAAATTAACTGGGACACGGTGTGGAGAGCAAACACAACCTCGCCGTTCAGAGTGAGCACTCAGATGAACCGTAACGTGGGTCTGCTGAGACTCTTCCCAGGCATCACTGCGATGACCgtgaagTCCTTCCTGCAGGCGCCCATGGAGGCCATCGTCCTGGAGACGTATGGTAGTGGAAACGCCCCTGATAACTGTGCTGACCTGCTTGAGGAGTTCCGGAATGCCACAGAGAGGGGCGTGATCATGGTCAACTGCACCCAGTGTCTGAGGGGTTCTGTCACCACATCGTACGCCACTGGAAAGGCCTTGAGTGACGCAGGACTGGTGGCAGGCAGTGACATGACTTCTGAGGCTGCCCTGTGCAAGCTGTCCTACGTGCTGGCCAGGACGGACCTCAGCATAGAGAACAAAAGAAAGATGCTGAGTCAGAACCTGCGGGGAGAGATGAAGGCTGACCTGCAGGGGGCCAAGCTCACTCTGAGCGATGACCTGGATGAAGTCTCTGAGCATCAGCTGTAA

Function

NR:

description
LOW QUALITY PROTEIN: 60 kDa lysophospholipase-like

GO: NA

KEGG:

id description
K01424 E3.5.1.1, ansA, ansB; L-asparaginase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953821.1 True 1107 mRNA 0.53 10 41745407 41765102

Neighbor

gene id symbol gene type direction distance location
LOC110498352 LOC106595507 coding downstream 50351 41562540 ~ 41695056 (-)
LOC110497879 LOC106595751 coding downstream 409816 41333522 ~ 41335591 (-)
c19h14orf180 LOC106595839 coding downstream 440837 41287382 ~ 41304570 (-)
LOC110497873 LOC106596382 coding downstream 533786 41204234 ~ 41211621 (-)
LOC110497872 LOC106596263 coding downstream 541323 41199845 ~ 41204084 (-)
LOC110497880 LOC106595288 coding upstream 10747 41775849 ~ 41831526 (-)
vcpkmt vcpkmt coding upstream 102572 41867674 ~ 41870961 (-)
LOC110497889 LOC107085600 coding upstream 287568 42052670 ~ 42062060 (-)
LOC110497892 LOC106593771 coding upstream 379470 42144572 ~ 42158726 (-)
LOC110498354 LOC106593417 coding upstream 407039 42172141 ~ 42173747 (-)
G1625380 NA non-coding downstream 61459 41683535 ~ 41683948 (-)
G1625290 NA non-coding downstream 196635 41548435 ~ 41548772 (-)
G1625287 NA non-coding downstream 198865 41546015 ~ 41546542 (-)
G1625274 NA non-coding downstream 216155 41529034 ~ 41529252 (-)
G1625266 NA non-coding downstream 230741 41514402 ~ 41514666 (-)
G1625439 LOC106594233 non-coding upstream 154136 41919238 ~ 41919952 (-)
G1625490 NA non-coding upstream 173101 41938203 ~ 41938464 (-)
G1625549 NA non-coding upstream 230353 41995455 ~ 41995928 (-)
G1625568 LOC106593970 non-coding upstream 262484 42027586 ~ 42029440 (-)
G1625571 NA non-coding upstream 272515 42037617 ~ 42037905 (-)
G1625066 NA other downstream 550648 41194433 ~ 41194759 (-)
LOC110497865 LOC106611002 other downstream 582995 41144107 ~ 41162883 (-)
LOC110497863 LOC106596965 other downstream 665308 41052866 ~ 41080347 (-)
LOC110498350 NA other downstream 1049646 40689096 ~ 40699267 (-)
G1624737 NA other downstream 1113669 40630578 ~ 40631738 (-)
G1625428 arf6 other upstream 81153 41846255 ~ 41850433 (-)
G1626105 NA other upstream 490133 42255235 ~ 42255797 (-)
LOC110498355 atg2b other upstream 700723 42465705 ~ 42480874 (-)
G1626232 LOC106611303 other upstream 875347 42640449 ~ 42641273 (-)
G1626324 NA other upstream 994192 42759294 ~ 42838434 (-)

Expression


Co-expression Network