LOC110497900


Basic Information

Item Value
gene id LOC110497900
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42388876 ~ 42398844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954859.1
ACTAGTGCGGTTCCTTGTTGTGATTGGTTAAGCAGTACAGGAAGTACCTGCCTCGGTTACATATTTTTTTTCGCCTTTGttacatatatataaatatacaacaTGGCTGGATTATAGAATGGCCACCGCTGCGAATAGGACATATGCAAGGCGAGTTTAGTCCTGATTAAGAACATCCCAACAATACAGTTGGAGTTGTTTTAGGGTTAGACGAGTCCCACGTTACGTTGTTTTAAAGATGCATAGTCTCACTAAAGCAACGCTGGTTTTAAATGGAATTGGGCGGCGGTGTGTTGCTGTGAATCGTTTTTCAGGAGCAAAAATCATTTGCAGGGGACTCGCGTGTGCAGCAGAACATGGGGAACATGAAATGAGCTTTATGATGTCATTATATCTGGAGGAGGAATGGTTGGGACCGCTATGGCTTGGTCTTTAGGCACGGATCCAAGCTTGGAGGGGAAGAAGATTCTGCTGCTTGAGGCAGGCAACAAAAAGGTGATGGACAAGATCCCAGACGCCTATAGTACCAGAGTCAGCTCCATCAGCCCGGGCTCTGCCAACCTCCTCAGTGgTGTTGGAGCATGGAATCACATTATGAACATGAGATGTAAAAGCCCTATCAGAAGATGCAAGTCCGTTTTTGGAAACTCCACTCTACCACAAGCACTAAAgGTTTGGGATGCCTGCTCAGATGCCCTGATTACATTCGATAAGGAGAACCTGCAGGACGAGATGGCATACATTGTGGAGAACGACATCATTGTGGCAGCCCTAACAAAACAGCTGGAGAATCTGTCTGATCAGGTGAAGGTCCAGTACAAAACCAAGGTGGTGATGTCTCACCAGGTAGCTGAATCCATCCCCTGGGTTCAGGTCACCCTGGCCAATGGACAGACATTTCAAACCAAACTACTGATTGGAGCAGATGGGCCAAATTTGATGGTGAGGCAGGAGGCGGGGATACCCACGGTCAAGTGGAATTACGACCAATCAGCTGTTGTGGCTGTCCTGCATCTTTGTCGGACACAGAGAGCTCTTTGGTGTGGTCGACTAGCCACCGCCTTGCTGAGGAGCTACTGCAGCTAGTTGAGGAGTGCTTTGTGGACACCATCAACTCTGCCTTTCCCCCTTCTCTGTCGGTCTATTCCTCTACCCTCTGTtactgcctctctttctctgtctcttcctttctggcttgatctcttcctctgtctctcttcctctctccctttgtgtcttcgtgtctctctctatctccctctatctgtgTCGTCTCTGTCTGCCAGTGGCGGGGCAAGAATCGGCCCAAAAAGCTGGGTCATGTTCCTCCTGGGCATGGGCCACGCATCAGAGTACATCAGGCACCGGGTGGCCCTCATCGGGGGCCGTGCAGGGGCCATGCAGCATCTGTTGGAATATGAGGCGTAACGGCAGCGACACAACCTGCCGATGATGGCCGCCATCGACCTGATGAAACGACTCTACTCAACTAACGCTGCCCATGTGGTTCTCTTACGCACCTTCGGTCTGCAAGCCACCAACACACTACCAGCCATAAAAGAGTAGATCATGGCGTTTGCAAGCGAGTGACACGTACACTGGTCCTGAAGTGGCAGTTTGACGGGACTCCAAAGATGATATGCCACTGTGACTTTGTGAATGGAATGTAAAGTGTAAATTAATAAAGTTATATATTATGCTCTGTTATTACATGAACATCGCTATACCTGCATGTCTTTCTTTGTGTGTTGATGATTTTGGAAACTTCCAAGCATCATTCTGTATCAGTTTCACAATCTGTTGGAATTTTTATGACAGAACATTTGTTTcagaaaacatgtatttaaaatgttttgcaaatgtattgagaATGAAATGCATAAATATataatttacttaagtatt
>XM_036954860.1
ACTAGTGCGGTTCCTTGTTGTGATTGGTTAAGCAGTACAGGAAGTACCTGCCTCGGTTACATATTTTTTTTCGCCTTTGttacatatatataaatatacaacaTGGCTGGATTATAGAATGGCCACCGCTGCGAATAGGACATATGCAAGGCGAGTTTAGTCCTGATTAAGAACATCCCAACAATACAGTTGGAGTTGTTTTAGGGTTAGACGAGTCCCACGTTACGTTGTTTTAAAGATGCATAGTCTCACTAAAGCAACGCTGGTTTTAAATGGAATTGGGCGGCGGTGTGTTGCTGTGAATCGTTTTTCAGGAGCAAAAATCATTTGCAGGGGACTCGCGTGTGCAGCAGAACATGGGGAACATGAAATGAGCTTTATGATGTCATTATATCTGGAGGAGGAATGGTTGGGACCGCTATGGCTTGGTCTTTAGGCACGGATCCAAGCTTGGAGGGGAAGAAGATTCTGCTGCTTGAGGCAGGCAACAAAAAGGTGATGGACAAGATCCCAGACGCCTATAGTACCAGAGTCAGCTCCATCAGCCCGGGCTCTGCCAACCTCCTCAGTGgTGTTGGAGCATGGAATCACATTATGAACATGAGATGTAAAAGCCCTATCAGAAGATGCAAGTCCGTTTTTGGAAACTCCACTCTACCACAAGCACTAAAgGTTTGGGATGCCTGCTCAGATGCCCTGATTACATTCGATAAGGAGAACCTGCAGGACGAGATGGCATACATTGTGGAGAACGACATCATTGTGGCAGCCCTAACAAAACAGCTGGAGAATCTGTCTGATCAGGTGAAGGTCCAGTACAAAACCAAGGTGGTGATGTCTCACCAGGTAGCTGAATCCATCCCCTGGGTTCAGGTCACCCTGGCCAATGGACAGACATTTCAAACCAAACTACTGATTGGAGCAGATGGGCCAAATTTGATGGTGAGGCAGGAGGCGGGGATACCCACGGTCAAGTGGAATTACGACCAATCAGCTGTTGTGGCTGTCCTGCATCTTTGTCGGACACAGAGAGCTCTTTGGTGTGGTCGACTAGCCACCGCCTTGCTGAGGAGCTACTGCAGCTAGTTGAGGAGTGCTTTGTGGACACCATCAACTCTGCCTTTCCCCCTTCTCTGTCGGTCTATTCCTCTACCCTCTGTtactgcctctctttctctgtctcttcctttctggcttgatctcttcctctgtctctcttcctctctccctttgtgtcttcgtgtctctctctatctccctctatctgtgTCGTCTCTGTCTGCCAGTGGCGGGGCAAGAATCGGCCCAAAAAGCTGGGTCATGTTCCTCCTGGGCATGGGCCACGCATCAGAGTACATCAGGCACCGGGTGGCCCTCATCGGGTAAGTCAACACTCATCCCTGTGGGACACTGAGTTATTGAACTTCACATCGGTTTGCCTTGGAAAACcattacttataattcacttggAATTTTGTAAATAGAAGGTTTATATGCCCTTATTCTGTAAAGGTATAAAAGGGTCATAAAAACAATCATTATCGACTGCATCTAAAAAAAGATTTGTTTAATTCCTCAGCTCAATCATTGGTATTTCTGTATATTTGAAGGGAATTCTTGCTCTGGTCCTACCCCATAGATGTAGTGACTAGGTCCTACCCCGTAGATGTGGTGACTAGGTCCTACCCCGTAGATGTGGTGACTAGGTCCTACCCCGTAGATGTGGTGACTAGGTCCTACCCCGTAGATGTGGTGACTAGGTCCTACCCCGTAGATGTGGTGACTAGGTCCTACCCCGTAGATGTGGTGACTAGGTCCTACCCCGTAGATGTGGTGACTAGGTCCTACCCCGTAGATGTAGTGACTTGGTCCTACCCCGTAGATGTAGTGACTAGGTCCTACCCCGTAGATGTAGTGACTAGGTCCTACCCCGTAGATGTAGTGACTAGGTTTACATGGCGGGGGTCTTTAGTTTTCTTTGCAGGGATGCAGCACACCGCGTCCACCCTCTAGCTGGCCAAGGAGCCAACCTGGGCTTTGGGGATGTGGCCTGTCTCACTAACTTTAAGGATCTGGGGGCCGTGCAGGGGCCATGCAGCATCTGTTGGAATATGAGGCGTAACGGCAGCGACACAACCTGCCGATGATGGCCGCCATCGACCTGATGAAACGACTCTACTCAACTAACGCTGCCCATGTGGTTCTCTTACGCACCTTCGGTCTGCAAGCCACCAACACACTACCAGCCATAAAAGAGTAGATCATGGCGTTTGCAAGCGAGTGACACGTACACTGGTCCTGAAGTGGCAGTTTGACGGGACTCCAAAGATGATATGCCACTGTGACTTTGTGAATGGAATGTAAAGTGTAAATTAATAAAGTTATATATTATGCTCTGTTATTACATGAACATCGCTATACCTGCATGTCTTTCTTTGTGTGTTGATGATTTTGGAAACTTCCAAGCATCATTCTGTATCAGTTTCACAATCTGTTGGAATTTTTATGACAGAACATTTGTTTcagaaaacatgtatttaaaatgttttgcaaatgtattgagaATGAAATGCATAAATATataatttacttaagtatt
>XM_036954861.1
TGCGGTTCCTTGTTGTGATTGGTTAAGCAGTACAGGAAGTACCTGCCTCGGTTACATATTTTTTTTCGCCTTTGttacatatatataaatatacaacaTGGCTGGATTATAGAATGGCCACCGCTGCGAATAGGACATATGCAAGGCGAGTTTAGTCCTGATTAAGAACATCCCAACAATACAGTTGGAGTTGTTTTAGGGTTAGACGAGTCCCACGTTACGTTGTTTTAAAGATGCATAGTCTCACTAAAGCAACGCTGGTTTTAAATGGAATTGGGCGGCGGTGTGTTGCTGTGAATCGTTTTTCAGGAGCAAAAATCATTTGCAGGGGACTCGCGTGTGCAGCAGAACATGGGGAACATGAAATGAGCTTTATGATGTCATTATATCTGGAGGAGGAATGGTTGGGACCGCTATGGCTTGGTCTTTAGGCACGGATCCAAGCTTGGAGGGGAAGAAGATTCTGCTGCTTGAGGCAGGCAACAAAAAGGTGATGGACAAGATCCCAGACGCCTATAGTACCAGAGTCAGCTCCATCAGCCCGGGCTCTGCCAACCTCCTCAGTGgTGTTGGAGCATGGAATCACATTATGAACATGAGATGTAAAAGCCCTATCAGAAGATGCAAGTCCGTTTTTGGAAACTCCACTCTACCACAAGCACTAAAgGTTTGGGATGCCTGCTCAGATGCCCTGATTACATTCGATAAGGAGAACCTGCAGGACGAGATGGCATACATTGTGGAGAACGACATCATTGTGGCAGCCCTAACAAAACAGCTGGAGAATCTGTCTGATCAGGTGAAGGTCCAGTACAAAACCAAGGTGGTGATGTCTCACCAGGTAGCTGAATCCATCCCCTGGGTTCAGGTCACCCTGGCCAATGGACAGACATTTCAAACCAAACTACTGATTGGAGCAGATGGGCCAAATTTGATGGTGAGGCAGGAGGCGGGGATACCCACGGTCAAGTGGAATTACGACCAATCAGCTGTTGTGGCTGTCCTGCATCTGTGAGATTTGTCGGACACAGAGAGCTCTTTGGTGTGGTCGACTAGCCACCGCCTTGCTGAGGAGCTACTGCAGCTAGTTGAGGAGTGCTTTGTGGACACCATCAACTCTGCCTTTCCCCCTTCTCTGTCGGTCTATTCCTCTACCCTCTGTtactgcctctctttctctgtctcttcctttctggcttgatctcttcctctgtctctcttcctctctccctttgtgtcttcgtgtctctctctatctccctctatctgtgTCGTCTCTGTCTGCCAGTGGCGGGGCAAGAATCGGCCCAAAAAGCTGGGTCATGTTCCTCCTGGGCATGGGCCACGCATCAGAGTACATCAGGCACCGGGTGGCCCTCATCGGGGGCCGTGCAGGGGCCATGCAGCATCTGTTGGAATATGAGGCGTAACGGCAGCGACACAACCTGCCGATGATGGCCGCCATCGACCTGATGAAACGACTCTACTCAACTAACGCTGCCCATGTGGTTCTCTTACGCACCTTCGGTCTGCAAGCCACCAACACACTACCAGCCATAAAAGAGTAGATCATGGCGTTTGCAAGCGAGTGACACGTACACTGGTCCTGAAGTGGCAGTTTGACGGGACTCCAAAGATGATATGCCACTGTGACTTTGTGAATGGAATGTAAAGTGTAAATTAATAAAGTTATATATTATGCTCTGTTATTACATGAACATCGCTATACCTGCATGTCTTTCTTTGTGTGTTGATGATTTTGGAAACTTCCAAGCATCATTCTGTATCAGTTTCACAATCTGTTGGAATTTTTATGACAGAACATTTGTTTcagaaaacatgtatttaaaatgttttgcaaatgtattgagaATGAAATGCATAAATATataatttacttaagtatt

Function

NR:

description
ubiquinone biosynthesis monooxygenase COQ6, mitochondrial isoform X2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0044464 obsolete cell part cellular_component
GO:0004497 monooxygenase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954859.1 False 1905 mRNA 0.47 10 42388876 42398844
XM_036954860.1 False 2599 mRNA 0.47 10 42388876 42398844
XM_036954861.1 True 1907 mRNA 0.47 10 42388881 42398844

Neighbor

gene id symbol gene type direction distance location
LOC110497898 tmem63c coding upstream 13690 42340967 ~ 42375186 (+)
LOC110497896 LOC106593515 coding upstream 88353 42276978 ~ 42300523 (+)
LOC110497895 NA coding upstream 158398 42228256 ~ 42230812 (+)
LOC110497893 NA coding upstream 226589 42158731 ~ 42162287 (+)
tmem260 LOC106593970 coding upstream 359425 41988770 ~ 42029506 (+)
LOC110497904 bbof1 coding downstream 22909 42421753 ~ 42431912 (+)
gstz1 gstz1 coding downstream 45595 42444439 ~ 42448291 (+)
LOC110497909 gskip coding downstream 82158 42481002 ~ 42484731 (+)
isca2 LOC106591720 coding downstream 93374 42492218 ~ 42494071 (+)
LOC110497912 LOC106591546 coding downstream 165474 42564318 ~ 42570994 (+)
G1625761 NA non-coding upstream 51163 42337498 ~ 42337713 (+)
G1625718 NA non-coding upstream 121918 42266754 ~ 42266958 (+)
G1625714 NA non-coding upstream 132839 42255779 ~ 42256037 (+)
G1625713 NA non-coding upstream 133234 42255381 ~ 42255642 (+)
G1625822 NA non-coding downstream 76196 42475040 ~ 42475248 (+)
G1625823 NA non-coding downstream 76688 42475532 ~ 42475793 (+)
G1625813 NA non-coding downstream 96809 42495653 ~ 42497282 (+)
G1625828 LOC106611036 non-coding downstream 99111 42497955 ~ 42498451 (+)
G1625888 NA non-coding downstream 190458 42589302 ~ 42589684 (+)
G1625710 NA other upstream 137305 42250731 ~ 42251571 (+)
G1624524 NA other upstream 351758 42036328 ~ 42037118 (+)
G1624565 LOC100846954 other upstream 352932 42035353 ~ 42035944 (+)
G1624560 NA other upstream 378546 42009961 ~ 42010330 (+)
LOC110497931 LOC106589425 other downstream 912996 43279273 ~ 43440028 (+)
G1627319 NA other downstream 1415882 43814593 ~ 43816501 (+)
G1628073 LOC106610840 other downstream 2015478 44414322 ~ 44448672 (+)
G1628486 NA other downstream 2284518 44683362 ~ 44748925 (+)
G1628488 NA other downstream 2289538 44688382 ~ 44747446 (+)

Expression


Co-expression Network