noxred1 (noxred1)


Basic Information

Item Value
gene id noxred1
gene name noxred1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 42459451 ~ 42465605 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574365.2
CATAGAAACAGTGGGGAAGCAACAAACGGGACAGAGTTGAACTTTTCCGATGATGTTGGACTTCACTGTAAATCTTAACAGCCTTGGTTTCGAGTGTGGATTAAGTGAAAATGAAAAAGAATTCATATTCCTCCGTGCACGCGCTAATGGATTGACTGTATGTGGATGTGTACATGCAGCATTCTTGTGCAAACTTGCATATTCATTGAGAGAAAGCATTGGCCTACCAAGACAAATTGAAGACGTAGATATGGTTTTACTGCCATCAAATATATCTAAAAAAGGAAAAGGTCTGACTGTTGGTGTGCTTGGAGGGGGACACATTGGAAAACAGCTGGTCCAAGTGCTTCTTGAAAAGAATGGCCTAAAACCGTCACAAATCAACATTTCCTCAAGGAGGCCTGAAACTCTAGAGGAATTTGTGAAGAGGGGTATCATGTGTTACTTTGACAACCAGCGATTGGTGGCCTGGGCAGATGTGCTGTTCCTCTGTTGCCTTCCCTCTCACCTACCCAAGGTGTGTGCAGAGCTCCAATCCCACCTACCAAAGCACTGTCTGGTGTACAGCTTCCTCTCTGCCGTACCTTTAAACAgATTGGCACAGCTTCTTGGTCACAGCTTCATTCTCAAACCACAGTATGAGTTTGTGGCTTGTGACTCTGTCAACATGTGGCTTTCCCAAGGTCATGTGACCGCGGCTTTGAAAGACCCAGAAGTAATAGATGCATCCTGTCCTCTTGCCATGAGAGGTGGGCTCTGTCTGGATCCAAAGTGGCTGTTTGGGTTGTTGTACAGTCTCTTGAACATGTGCACCGCGGCAAATGTGGGATCCACTGAAGCTCTTGGGCTGATCAATGAGCTGTTCCAGTTAAAAGGTCCAGGCACTGTGGCATTCATCCTGAATAATTTTGTCCATTCCTCCTATGCATCTCCCCTGACACCAGATGAGTCTTTCCCCTGGATTAATTTAGTTGATGTTCAGTCTAAGGAGACACCATTATCATGCTTCATATCAAGAAATAACAGTATGCAGGGTTGTCTCTCTGCTCTATACAATTCAGTAATGGTGGATCCACTGAAGGGAAAGAAAGAGCCTGGAAAACCCAAAGATGGAACTCTGTCTGTCATAACACCAAGTCATTGTAAAAAATCTGATTTTGTGTGATGTTGATTTACTCTCAAACTGTAACAGAATAAAATAAAGGGATTgagtatattttttttatcagatCAATTAATGTACCCTTCAAAACGTATAACAATCTCAGGTTATCATCAGGGCATAGGAATAAGGATGGGGACCATCCAcatatctatccatccatcatcAATCAACACCGGGCAATAATTTCTCCACTGCTTTATTCAGTgttcatcatcataatcatcaagCTGTAGGACTAGTTGACGTGGCTTGGTCTGGACACGAAAAGTTTTCCCCTCAACAAAATCTTAGTATTTTCCCTGAGTGTAATTAACATTTTGAAGTGTCAGTCACGGTAATATTACTGTA
>XM_021574366.2
CATAGAAACAGTGGGGAAGCAACAAACGGGACAGAGTTGAACTTTTCCGATGATGTTGGACTTCACTGTAAATCTTAACAGCCTTGGTTTCGAGTGTGGATTAAGTGAAAATGAAAAAGAATTCATATTCCTCCGTGCACGCGCTAATGGATTGACTGTATGTGGATGTGTACATGCAGCATTCTTGTGCAAACTTGCATATTCATTGAGCATTGGCCTACCAAGACAAATTGAAGACGTAGATATGGTTTTACTGCCATCAAATATATCTAAAAAAGGAAAAGGTCTGACTGTTGGTGTGCTTGGAGGGGGACACATTGGAAAACAGCTGGTCCAAGTGCTTCTTGAAAAGAATGGCCTAAAACCGTCACAAATCAACATTTCCTCAAGGAGGCCTGAAACTCTAGAGGAATTTGTGAAGAGGGGTATCATGTGTTACTTTGACAACCAGCGATTGGTGGCCTGGGCAGATGTGCTGTTCCTCTGTTGCCTTCCCTCTCACCTACCCAAGGTGTGTGCAGAGCTCCAATCCCACCTACCAAAGCACTGTCTGGTGTACAGCTTCCTCTCTGCCGTACCTTTAAACAgATTGGCACAGCTTCTTGGTCACAGCTTCATTCTCAAACCACAGTATGAGTTTGTGGCTTGTGACTCTGTCAACATGTGGCTTTCCCAAGGTCATGTGACCGCGGCTTTGAAAGACCCAGAAGTAATAGATGCATCCTGTCCTCTTGCCATGAGAGGTGGGCTCTGTCTGGATCCAAAGTGGCTGTTTGGGTTGTTGTACAGTCTCTTGAACATGTGCACCGCGGCAAATGTGGGATCCACTGAAGCTCTTGGGCTGATCAATGAGCTGTTCCAGTTAAAAGGTCCAGGCACTGTGGCATTCATCCTGAATAATTTTGTCCATTCCTCCTATGCATCTCCCCTGACACCAGATGAGTCTTTCCCCTGGATTAATTTAGTTGATGTTCAGTCTAAGGAGACACCATTATCATGCTTCATATCAAGAAATAACAGTATGCAGGGTTGTCTCTCTGCTCTATACAATTCAGTAATGGTGGATCCACTGAAGGGAAAGAAAGAGCCTGGAAAACCCAAAGATGGAACTCTGTCTGTCATAACACCAAGTCATTGTAAAAAATCTGATTTTGTGTGATGTTGATTTACTCTCAAACTGTAACAGAATAAAATAAAGGGATTgagtatattttttttatcagatCAATTAATGTACCCTTCAAAACGTATAACAATCTCAGGTTATCATCAGGGCATAGGAATAAGGATGGGGACCATCCAcatatctatccatccatcatcAATCAACACCGGGCAATAATTTCTCCACTGCTTTATTCAGT
>XM_021574367.2
CATAGAAACAGTGGGGAAGCAACAAACGGGACAGAGTTGAACTTTTCCGATGATGTTGGACTTCACTGTAAATCTTAACAGCCTTGGTTTCGAGTGTGGATTAAGTGAAAATGAAAAAGAATTCATATTCCTCCGTGCACGCGCTAATGGATTGACTGTATGTGGATGTGTACATGCAGCATTCTTGTGCAAACTTGCATATTCATTGAGAGAAAGCATTGGCCTACCAAGACAAATTGAAGACGTAGATATGGTTTTACTGCCATCAAATATATCTAAAAAAGGAAAAGGTCTGACTGTTGGTGTGCTTGGAGGGGGACACATTGGAAAACAGCTGGTCCAAGTGCTTCTTGAAAAGAATGGCCTAAAACCGTCACAAATCAACATTTCCTCAAGGAGGCCTGAAACTCTAGAGGAATTTGTGAAGAGGGGTATCATGTGTTACTTTGACAACCAGCGATTGGTGGCCTGGGCAGATGTGCTGTTCCTCTGTTGCCTTCCCTCTCACCTACCCAAGGTGTGTGCAGAGCTCCAATCCCACCTACCAAAGCACTGTCTGGTGTACAGCTTCCTCTCTGCCGTACCTTTAAACAgATTGGCACAGCTTCTTGGTCACAGCTTCATTCTCAAACCACAGTATGAGTTTGTGGCTTGTGACTCTGTCAACATGTGGCTTTCCCAAGGTCATGTGACCGCGGCTTTGAAAGACCCAGAAGTAATAGATGCATCCTGTCCTCTTGCCATGAGAGGTGGGCTCTGTCTGGATCCAAAGTGGCTGTTTGGGTTGTTGTACAGTCTCTTGAACATGTGCACCGCGGCAAATGTGGGATCCACTGAAGCTCTTGGGCTGATCAATGAGCTGTTCCAGTTAAAAGGTCCAGGCACTGTGGCATTCATCCTGAATAATTTTGTCCATTCCTCCTATGCATCTCCCCTGACACCAGATGAGTGAGTTTTCATTTAGCACACATTTTGTACAAAGGGTTTTTCTTATGAGAAAAGTTAACTTACATATTTAATGTAACCTGTGTTGAAACTCAAACACACAGGAATAAAAagacaaacatatatatatttttttaaacacaaatGAATGATTAGGCTAACTAACCATACTTTTTAATTTGTCTCCCATGTTGTCAAGGTCTTTCCCCTGGATTAATTTAGTTGATGTTCAGTCTAAGGAGACACCATTATCATGCTTCATATCAAGAAATAACAGTATGCAGGGTTGTCTCTCTGCTCTATACAATTCAGTAATGGTGGATCCACT

Function

symbol description
noxred1 Predicted to enable pyrroline-5-carboxylate reductase activity. Predicted to be involved in L-proline biosynthetic process. Orthologous to human NOXRED1 (NADP dependent oxidoreductase domain containing 1).

NR:

description
NADP-dependent oxidoreductase domain-containing protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574365.2 False 1513 mRNA 0.43 7 42459451 42465605
XM_021574366.2 False 1364 mRNA 0.43 7 42459594 42465605
XM_021574367.2 True 1273 mRNA 0.42 6 42459887 42465605

Neighbor

gene id symbol gene type direction distance location
LOC110497908 tmed8 coding downstream 82 42455455 ~ 42459369 (-)
LOC110497906 NA coding downstream 8434 42448377 ~ 42451017 (-)
LOC110497902 aldh6a1 coding downstream 15193 42431984 ~ 42444258 (-)
LOC110497901 entpd5 coding downstream 44630 42399916 ~ 42414821 (-)
ngb1 ngb coding downstream 76186 42351397 ~ 42383265 (-)
LOC110498355 atg2b coding upstream 100 42465705 ~ 42480874 (-)
npc2 npc2 coding upstream 24252 42489857 ~ 42492062 (-)
eml5 LOC106591625 coding upstream 28853 42494458 ~ 42561969 (-)
LOC110497913 NA coding upstream 105223 42570828 ~ 42571457 (-)
LOC110497915 LOC106591465 coding upstream 136153 42601758 ~ 42604764 (-)
G1626190 NA non-coding downstream 11147 42445613 ~ 42448304 (-)
G1626160 NA non-coding downstream 79016 42378654 ~ 42380435 (-)
G1626158 NA non-coding downstream 82178 42377039 ~ 42377273 (-)
LOC118941477 NA non-coding downstream 84291 42367530 ~ 42375160 (-)
G1626154 NA non-coding downstream 85535 42370814 ~ 42373916 (-)
G1626212 NA non-coding upstream 21117 42486722 ~ 42486974 (-)
G1626254 NA non-coding upstream 98750 42564355 ~ 42565402 (-)
G1626231 NA non-coding upstream 121330 42586935 ~ 42588868 (-)
G1626267 NA non-coding upstream 125377 42590982 ~ 42591311 (-)
G1626105 NA other downstream 203654 42255235 ~ 42255797 (-)
G1625428 arf6 other downstream 609018 41846255 ~ 41850433 (-)
G1625066 NA other downstream 1264692 41194433 ~ 41194759 (-)
LOC110497865 LOC106611002 other downstream 1297039 41144107 ~ 41162883 (-)
LOC110497863 LOC106596965 other downstream 1379352 41052866 ~ 41080347 (-)
G1626232 LOC106611303 other upstream 174844 42640449 ~ 42641273 (-)
G1626324 NA other upstream 293689 42759294 ~ 42838434 (-)
G1627068 NA other upstream 943122 43408727 ~ 43409109 (-)
LOC110498001 NA other upstream 3538160 46003765 ~ 46008718 (-)

Expression


Co-expression Network