Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110497913 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 42570828 ~ 42571457 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: C-type lectin domain family 4 member E-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002469743.2 | True | 458 | mRNA | 0.36 | 2 | 42570828 | 42571457 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eml5 | LOC106591625 | coding | downstream | 8859 | 42494458 ~ 42561969 (-) |
| npc2 | npc2 | coding | downstream | 78766 | 42489857 ~ 42492062 (-) |
| LOC110498355 | atg2b | coding | downstream | 89954 | 42465705 ~ 42480874 (-) |
| noxred1 | noxred1 | coding | downstream | 105223 | 42459451 ~ 42465605 (-) |
| LOC110497908 | tmed8 | coding | downstream | 111459 | 42455455 ~ 42459369 (-) |
| LOC110497915 | LOC106591465 | coding | upstream | 30301 | 42601758 ~ 42604764 (-) |
| erg28 | LOC106591002 | coding | upstream | 97579 | 42669036 ~ 42671081 (-) |
| tgfb3 | LOC106590795 | coding | upstream | 193420 | 42764877 ~ 42786064 (-) |
| LOC110498358 | LOC106590063 | coding | upstream | 528768 | 43100225 ~ 43110498 (-) |
| LOC110497926 | LOC106589845 | coding | upstream | 553977 | 43125434 ~ 43135492 (-) |
| G1626254 | NA | non-coding | downstream | 5426 | 42564355 ~ 42565402 (-) |
| G1626212 | NA | non-coding | downstream | 83854 | 42486722 ~ 42486974 (-) |
| G1626190 | NA | non-coding | downstream | 122524 | 42445613 ~ 42448304 (-) |
| G1626160 | NA | non-coding | downstream | 190393 | 42378654 ~ 42380435 (-) |
| G1626231 | NA | non-coding | upstream | 15478 | 42586935 ~ 42588868 (-) |
| G1626267 | NA | non-coding | upstream | 19525 | 42590982 ~ 42591311 (-) |
| G1626288 | NA | non-coding | upstream | 76132 | 42647589 ~ 42647792 (-) |
| G1626291 | NA | non-coding | upstream | 78673 | 42650130 ~ 42650687 (-) |
| G1626294 | NA | non-coding | upstream | 83052 | 42654509 ~ 42655253 (-) |
| G1626105 | NA | other | downstream | 315031 | 42255235 ~ 42255797 (-) |
| G1625428 | arf6 | other | downstream | 720395 | 41846255 ~ 41850433 (-) |
| G1625066 | NA | other | downstream | 1376069 | 41194433 ~ 41194759 (-) |
| LOC110497865 | LOC106611002 | other | downstream | 1408416 | 41144107 ~ 41162883 (-) |
| G1626232 | LOC106611303 | other | upstream | 68992 | 42640449 ~ 42641273 (-) |
| G1626324 | NA | other | upstream | 187837 | 42759294 ~ 42838434 (-) |
| G1627068 | NA | other | upstream | 837270 | 43408727 ~ 43409109 (-) |
| LOC110498001 | NA | other | upstream | 3432308 | 46003765 ~ 46008718 (-) |
| G1631005 | NA | other | upstream | 4047750 | 46619207 ~ 46629506 (-) |
