Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_035119 |
| gene name | map1aa |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 52830254 ~ 52876683 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| map1aa | Predicted to enable actin binding activity and microtubule binding activity. Predicted to be involved in microtubule cytoskeleton organization; neuron projection development; and regulation of microtubule depolymerization. Predicted to be part of microtubule associated complex. Predicted to be active in several cellular components, including dendrite; microtubule; and neuronal cell body. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human MAP1A (microtubule associated protein 1A). |
| id | name | namespace |
|---|---|---|
| GO:0016358 | dendrite development | biological_process |
| GO:0031114 | regulation of microtubule depolymerization | biological_process |
| GO:0000226 | microtubule cytoskeleton organization | biological_process |
| GO:0007409 | axonogenesis | biological_process |
| GO:0042995 | cell projection | cellular_component |
| GO:0030425 | dendrite | cellular_component |
| GO:0043025 | neuronal cell body | cellular_component |
| GO:0005829 | cytosol | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0005875 | microtubule associated complex | cellular_component |
| GO:0045202 | synapse | cellular_component |
| GO:0015631 | tubulin binding | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| GO:0008017 | microtubule binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-100426-2 | Predicted to enable actin binding activity and microtubule binding activity. Predicted to be involved in microtubule cytoskeleton organization; neuron projection development; and regulation of microtubule depolymerization. Predicted to be part of microtubule associated complex. Predicted to be active in several cellular components, including dendrite; microtubule; and neuronal cell body. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human MAP1A (microtubule associated protein 1A). |
| ensembl_id | ENSDARG00000059601 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00068275 | False | 11474 | mRNA | 0.39 | 3 | 52830254 | 52842007 |
| TCONS_00068276 | False | 8435 | mRNA | 0.42 | 4 | 52830254 | 52842605 |
| TCONS_00068277 | False | 8235 | mRNA | 0.43 | 7 | 52830324 | 52849940 |
| TCONS_00068278 | False | 8476 | mRNA | 0.43 | 8 | 52830324 | 52876683 |
| TCONS_00068279 | True | 8179 | mRNA | 0.43 | 7 | 52830330 | 52849913 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_035118 | NA | coding | downstream | 31189 | 52750422 ~ 52799065 (-) |
| XLOC_035115 | tcf12 | coding | downstream | 120319 | 52516706 ~ 52709935 (-) |
| XLOC_035117 | BX323544.2 | coding | downstream | 277884 | 52551760 ~ 52552370 (-) |
| XLOC_035116 | BX323544.1 | coding | downstream | 303824 | 52526304 ~ 52526430 (-) |
| XLOC_035114 | cgnl1 | coding | downstream | 332079 | 52431747 ~ 52498175 (-) |
| XLOC_035120 | tubgcp4 | coding | upstream | 53281 | 52929964 ~ 52950123 (-) |
| XLOC_035121 | CU469544.1 | coding | upstream | 63677 | 52940360 ~ 52940482 (-) |
| XLOC_035122 | cart3 | coding | upstream | 85949 | 52962632 ~ 52963493 (-) |
| XLOC_035123 | cdh1 | coding | upstream | 182616 | 53059299 ~ 53117237 (-) |
| XLOC_035124 | NA | coding | upstream | 199695 | 53076378 ~ 53080265 (-) |
| XLOC_035111 | NA | non-coding | downstream | 470408 | 52357176 ~ 52359846 (-) |
| XLOC_035109 | NA | non-coding | downstream | 677143 | 52150548 ~ 52153111 (-) |
| XLOC_035125 | BX322631.2 | non-coding | upstream | 236873 | 53113556 ~ 53113672 (-) |
| XLOC_035126 | BX649433.1 | non-coding | upstream | 764359 | 53641042 ~ 53641178 (-) |
| XLOC_035132 | CU896555.1 | non-coding | upstream | 1608882 | 54485565 ~ 54485685 (-) |
