LOC110497940 (LOC106588600)


Basic Information

Item Value
gene id LOC110497940
gene name LOC106588600
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43739972 ~ 43805811 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954886.1
CCCTTTCCCAACTCaatctgcctctcgctctctctccctcacacagacagacagaaaaacacacagacagacagacagagaggagaggggagcgcACATGTGAGTCGAGGACCTCCCTAACCGCTCAGCTCCACTCCGTATTCCCTCCCATGGCAGACAGAAaactggagaagaggaggaatagaggaatacTGCAGTGACCaaccagctgctctctctctcgccgctCCACTGCtttctttttaaaattatttctCCCCCCGTGCCAATTATACCATGAACCTGCCTGCTGCTTGTTCCTAAGGACAGCAAAACAGGGAGCAGTGGACAAGGTATTCTTTTGTTGCTAAGCCTCCTGAGCCTAGGACACAGCAGTCATGGAGGAGGGATCCAGAGACCAGGGACAACAGTGTGTGGGGACAACAGATCCTGAGGAGGACTCTCCCAACACAATCATCTACAGAAAGATTGAAGATGTCATTATGCGGCTACAGGATGAGAAGGCAGGAGGAGTGGCTATCCGAACTGTCAAGAGCTTCCTGTCCAAGATCCCCAGTGTGGTATCAGGAGCAGACATTGTGCAGTGGCTGATGAAAAACCTCTCCATTGAGGACTCAGCTGAAGCCATTCATTTAGGGAGCCTGATCGCTGCCCTTGGCTACCTCTTCCCCATCTCCGACCACGTCCTCACTCTCAAAGATGATGGGACCCTGTACCGCTTCCAGGCTCCATACTTCTGGCCCTCTAATTGTTGGGAACCTGAAAACACAGACTATGcTATCTACCTGTGCAAGCGCACCATGCAGAACAAGGCCAGGCTGGAGCTAGCTGACTACGAGGCTGAGAACCTGGCTCGACTGCAGAGGGCCTTCGCCAGGAAGTGGGAGTTCATCTTCATGCAAGCTGAGGCGCAGGTCAAGATCGACAGGAAGAAGGACAAGGCTGAGAGGAAGATCCTAGACAGCCAGGAGAGGGCATTCTGGGACGTCCATCGCCCTGTGCCAGGCTGTGTGAACACCACAGAGATGGACATTCGCAAGTGCCAGAGAGAGAAGAATCCACAGAGGGTGAAAAAGTCGGTGTATGGGGTAACAGACGACACCCAGACTCAGAGTTCAGTCCACCAGTCCCTCCCGTCCCAGCCGTCCAGGAAGCCCACCAGAGAGGACGTGCAGAAGGAGATTTCCTTCTTGAACATGCAGCTGGACAGACACTGTATGAAAATGTCCAAAGTAGCAGACAGCCTCATGAGCTACACAGAACAGTTCATGGTCTACGATCCTTTAGCGTCAACTGTTGAACCGTCCAACCCCTGGATCAGCGATGACATGACCTTCTGGGACCTGGAGGCTAGCCGGGACCCCAGCCAGCACCGTGTGAAGAAGTGGGGCTTCTCTCTGGAGGAGGCCCTCAAGGACCCAGCGGGACGGGACGCTTTCCTCAAGTTCCTGGAGTCGGAGTTCAGCTCAGAGAACCTCCGGTTCTGGTTGGCAGTGCAGGACCTGAAGCGGAGGCCCCTTGAGAACGTGGCAGCCAGGGCCCAGGAGATCTGGCAGGAGTTCCTGGCAGAGGGTGCACCCAGCTCCATCAACCTGGACTCCCACAGCTATGAGCTCACCAGCCATAACCTAAAAGATCCTGGACGATACAGCTATGAGGACGCACAGgAACACATCTTCAAGTTGATGAAAAGTGACAGCTATGCACGCTTCCTGAGATCCAACATTTATCAGGACCTCCTGCTAGCCAGAAAGAAGCTGACAGAGGGTGAGCAGGGCCGCCGTACCTCCCTGGAAAAGTTCACCCGCAGTGTGGGCAAGTCATTGACGGGCAAGCGGCTGACAGGGCTGATGCAGTCATCCTGACACTGCCTGGGCTGGAGGGGCACAGACAGACACCCCTGGAGGGGCCATGACCATGCAGGGATAGGGGCGCTGCTGGGGTGGGGAGCTCTGCTCTGGTGGGTCACAGACAGTGCCATGCAGCGCTGGAATTAGGACTACTCACAGAACCACAGATCATgccagctgggggggggggggggggggggggagcttgaCCCACTCACCACATGGTATGAACACAGTACAAGCACATACAGTAGGGCTACCTACAAGCTCAATGAGTCATAGTGGGACATGTACAGATAGGAAGTGAATGCAGACACTGGgttcgaagtttacatacaccttagccatatACATTAACACAGTAAAAATacagtaaaaaatccctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataatagtagagagagtgatttatttcagcttttatttctttcatcacattcccagtg
>XM_036954887.1
CCCTTTCCCAACTCaatctgcctctcgctctctctccctcacacagacagacagaaaaacacacagacagacagacagagaggagaggggagcgcACATGTGAGTCGAGGACCTCCCTAACCGCTCAGCTCCACTCCGTATTCCCTCCCATGGCAGACAGAAaactggagaagaggaggaatagaggaatacTGCAGTGACCaaccagctgctctctctctcgccgctCCACTGCtttctttttaaaattatttctCCCCCCGTGCCAATTATACCATGAACCTGCCTGCTGCTTGTTCCTAAGGACAGCAAAACAGGGAGCAGTGGACAAGCCTCCTGAGCCTAGGACACAGCAGTCATGGAGGAGGGATCCAGAGACCAGGGACAACAGTGTGTGGGGACAACAGATCCTGAGGAGGACTCTCCCAACACAATCATCTACAGAAAGATTGAAGATGTCATTATGCGGCTACAGGATGAGAAGGCAGGAGGAGTGGCTATCCGAACTGTCAAGAGCTTCCTGTCCAAGATCCCCAGTGTGGTATCAGGAGCAGACATTGTGCAGTGGCTGATGAAAAACCTCTCCATTGAGGACTCAGCTGAAGCCATTCATTTAGGGAGCCTGATCGCTGCCCTTGGCTACCTCTTCCCCATCTCCGACCACGTCCTCACTCTCAAAGATGATGGGACCCTGTACCGCTTCCAGGCTCCATACTTCTGGCCCTCTAATTGTTGGGAACCTGAAAACACAGACTATGcTATCTACCTGTGCAAGCGCACCATGCAGAACAAGGCCAGGCTGGAGCTAGCTGACTACGAGGCTGAGAACCTGGCTCGACTGCAGAGGGCCTTCGCCAGGAAGTGGGAGTTCATCTTCATGCAAGCTGAGGCGCAGGTCAAGATCGACAGGAAGAAGGACAAGGCTGAGAGGAAGATCCTAGACAGCCAGGAGAGGGCATTCTGGGACGTCCATCGCCCTGTGCCAGGCTGTGTGAACACCACAGAGATGGACATTCGCAAGTGCCAGAGAGAGAAGAATCCACAGAGGGTGAAAAAGTCGGTGTATGGGGTAACAGACGACACCCAGACTCAGAGTTCAGTCCACCAGTCCCTCCCGTCCCAGCCGTCCAGGAAGCCCACCAGAGAGGACGTGCAGAAGGAGATTTCCTTCTTGAACATGCAGCTGGACAGACACTGTATGAAAATGTCCAAAGTAGCAGACAGCCTCATGAGCTACACAGAACAGTTCATGGTCTACGATCCTTTAGCGTCAACTGTTGAACCGTCCAACCCCTGGATCAGCGATGACATGACCTTCTGGGACCTGGAGGCTAGCCGGGACCCCAGCCAGCACCGTGTGAAGAAGTGGGGCTTCTCTCTGGAGGAGGCCCTCAAGGACCCAGCGGGACGGGACGCTTTCCTCAAGTTCCTGGAGTCGGAGTTCAGCTCAGAGAACCTCCGGTTCTGGTTGGCAGTGCAGGACCTGAAGCGGAGGCCCCTTGAGAACGTGGCAGCCAGGGCCCAGGAGATCTGGCAGGAGTTCCTGGCAGAGGGTGCACCCAGCTCCATCAACCTGGACTCCCACAGCTATGAGCTCACCAGCCATAACCTAAAAGATCCTGGACGATACAGCTATGAGGACGCACAGgAACACATCTTCAAGTTGATGAAAAGTGACAGCTATGCACGCTTCCTGAGATCCAACATTTATCAGGACCTCCTGCTAGCCAGAAAGAAGCTGACAGAGGGTGAGCAGGGCCGCCGTACCTCCCTGGAAAAGTTCACCCGCAGTGTGGGCAAGTCATTGACGGGCAAGCGGCTGACAGGGCTGATGCAGTCATCCTGACACTGCCTGGGCTGGAGGGGCACAGACAGACACCCCTGGAGGGGCCATGACCATGCAGGGATAGGGGCGCTGCTGGGGTGGGGAGCTCTGCTCTGGTGGGTCACAGACAGTGCCATGCAGCGCTGGAATTAGGACTACTCACAGAACCACAGATCATgccagctgggggggggggggggggggggggagcttgaCCCACTCACCACATGGTATGAACACAGTACAAGCACATACAGTAGGGCTACCTACAAGCTCAATGAGTCATAGTGGGACATGTACAGATAGGAAGTGAATGCAGACACTGGgttcgaagtttacatacaccttagccatatACATTAACACAGTAAAAATacagtaaaaaatccctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataatagtagagagagtgatttatttcagcttttatttctttcatcacattcccagtg

Function

NR:

description
regulator of G-protein signaling 6-like isoform X1

GO: NA

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954886.1 False 2345 mRNA 0.53 17 43739972 43805811
XM_036954887.1 True 2326 mRNA 0.53 17 43739972 43805811
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110497935 LOC106589171 coding downstream 157609 43557223 ~ 43582363 (-)
LOC110497934 LOC106589256 coding downstream 213495 43511968 ~ 43526477 (-)
LOC110497930 LOC106589732 coding downstream 565117 43171743 ~ 43174855 (-)
LOC110497929 LOC106589786 coding downstream 568524 43162498 ~ 43171448 (-)
LOC110497927 lrrc74a coding downstream 591508 43141522 ~ 43148464 (-)
LOC110497941 LOC106588489 coding upstream 8900 43814711 ~ 43890059 (-)
gpx2 gpx2 coding upstream 100592 43906403 ~ 43907894 (-)
LOC110497943 LOC106588404 coding upstream 105376 43911187 ~ 43916292 (-)
LOC110497944 LOC106588122 coding upstream 112859 43918670 ~ 43923050 (-)
LOC110497946 LOC106587737 coding upstream 125662 43931473 ~ 43941320 (-)
G1627568 NA non-coding downstream 89591 43650177 ~ 43650381 (-)
G1627567 NA non-coding downstream 89969 43649636 ~ 43650003 (-)
G1627566 NA non-coding downstream 90571 43649137 ~ 43649401 (-)
G1627268 NA non-coding downstream 117549 43622220 ~ 43622423 (-)
G1627251 NA non-coding downstream 123061 43616671 ~ 43616911 (-)
G1627694 NA non-coding upstream 7059 43812870 ~ 43813094 (-)
G1627696 NA non-coding upstream 14662 43820473 ~ 43820704 (-)
G1627697 NA non-coding upstream 14908 43820719 ~ 43820934 (-)
G1627709 NA non-coding upstream 56193 43862004 ~ 43862472 (-)
G1627068 NA other downstream 330863 43408727 ~ 43409109 (-)
G1626324 NA other downstream 901538 42759294 ~ 42838434 (-)
G1626232 LOC106611303 other downstream 1098699 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 1269270 42465705 ~ 42480874 (-)
G1626105 NA other downstream 1484175 42255235 ~ 42255797 (-)
LOC110498001 NA other upstream 2197954 46003765 ~ 46008718 (-)
G1631005 NA other upstream 2813396 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 3024523 46830334 ~ 46830650 (-)
G1632192 LOC106575636 other upstream 4110484 47916295 ~ 47980466 (-)
G1632228 NA other upstream 4162703 47968514 ~ 47970332 (-)

Expression

LOC110497940(LOC106588600) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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LOC110497940(LOC106588600) Expression in each Bioproject

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LOC110497940(LOC106588600) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network