gpx2 (gpx2)


Basic Information

Item Value
gene id gpx2
gene name gpx2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 43906403 ~ 43907894 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574425.2
ttcaaaccagggactgtagtgatgccccttgcactgagatgcagtgccttagaccgctgtgccactcaggagtcAAATACTATATtttactgtacagtacatctCTGGTAAATGTTTCGATACTGTGGAATACATTGTTACTAGATCAGATTCACAGACAAGAGTCTGACTGTAAAACCGCTAGGTGTATTTGGCCAACATGAAGAACATTTCATTTGTATAAAAAAACATTACGTATTTAGTATGTAAgtattcttgttttttaaattaggCCATTTTAACAAACCATGCAACGAATAACCATAGATTTAATTTAACATGACCCCGTTCATACCGTTCTGTGCAAGTTTACAAGCTGAGATATGAGCCTATCTACCTTTGTGTGTGACAGTATTGAATGTCAGGTGGGTATCATTTTACTGCAGAGATATTTGACACCCGGGTAAGGCAGGCACATATCTGAAGTCCGGTGACCTGAGGTagtaatacacacagacacactggtccTCACTACTGCCAGTAACTACAGAACATGACCATGGCGTTCATCGCGAAGACCTTCTATGATCTGAAGGCCACGACCCTGGAGGGGGATTCAGTAGATTTCAATGTGTTTCGAGGGCGGGTGGTCCTCATTGAGAATGTGGCATCGCTCTGAGGGACAACCACCCGGGACTACAGCCAGCTCAACTTGCTCCAGAGCAAGTACCCTCACCGGCTAGTGGTCCTGGGCTTCCCCTGCAATCAGTTTGGCTACCAGGAGAACTGTTCAAATGGGGAGATCCTGAACTCATTAAAGTATGTGCGTCCAGGAGATGGCTACCAGCCTGGCTTCACTGTCTTTGAAAAGTGTGATGTGAATGGAACCAACACCCACCCTGTCTTTGCCTATTTGAAAGACAAACTTCCCTATCCTGATGATGATCCACACACCCTCATCCAGGATCCTAAATTCCTCATCTGGAGTCCCATCAGCAGGACAGACATCTCTTGGAATTTTGAGAAATTCCTGGTTGGGCCAGAGGGAGAGCCCTTTAAACGTTACAGCAAAAAATTTGAGACTATCAACATCGAGCCTGACATTCAAAGACTGTTGAGACTAaccaagacctgaaaatagcatgGGAATGTTCTCCTTGTGTACTACTCATTCTGCTACACAAATGACTTCACATCTATGATAGACAGGGACTATTATGGCGTCGTCCATCCTTTTGAGTTTTACTAAATGAGGTTAATATTCTAAAAACTTGGGAGTATTATCTGAGGCCATGTAAATGCTCAAGAGTTGTGGGTTATGCCTTGATAAGTCTTCTTGCTCATGTAATAAAAATATGTAAAGCA

Function

symbol description
gpx2 Is expressed in otic sensory epithelium. Orthologous to human GPX2 (glutathione peroxidase 2).

NR:

description
glutathione peroxidase 2

GO: NA

KEGG:

id description
K00432 gpx, btuE, bsaA; glutathione peroxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574425.2 True 1344 mRNA 0.43 2 43906403 43907894

Neighbor

gene id symbol gene type direction distance location
LOC110497941 LOC106588489 coding downstream 16344 43814711 ~ 43890059 (-)
LOC110497940 LOC106588600 coding downstream 100592 43739972 ~ 43805811 (-)
LOC110497935 LOC106589171 coding downstream 324040 43557223 ~ 43582363 (-)
LOC110497934 LOC106589256 coding downstream 379926 43511968 ~ 43526477 (-)
LOC110497930 LOC106589732 coding downstream 731548 43171743 ~ 43174855 (-)
LOC110497943 LOC106588404 coding upstream 3293 43911187 ~ 43916292 (-)
LOC110497944 LOC106588122 coding upstream 10776 43918670 ~ 43923050 (-)
LOC110497946 LOC106587737 coding upstream 23579 43931473 ~ 43941320 (-)
LOC110497949 LOC106587655 coding upstream 99424 44007318 ~ 44016833 (-)
LOC110497950 NA coding upstream 199436 44107330 ~ 44109395 (-)
G1627709 NA non-coding downstream 43931 43862004 ~ 43862472 (-)
G1627697 NA non-coding downstream 85469 43820719 ~ 43820934 (-)
G1627696 NA non-coding downstream 85699 43820473 ~ 43820704 (-)
G1627694 NA non-coding downstream 93309 43812870 ~ 43813094 (-)
G1627722 NA non-coding upstream 34752 43942646 ~ 43942882 (-)
G1627800 NA non-coding upstream 178934 44086828 ~ 44087040 (-)
G1627803 NA non-coding upstream 181478 44089372 ~ 44089606 (-)
G1627807 NA non-coding upstream 186704 44094598 ~ 44094913 (-)
G1627894 NA non-coding upstream 264916 44172810 ~ 44174312 (-)
G1627068 NA other downstream 497294 43408727 ~ 43409109 (-)
G1626324 NA other downstream 1067969 42759294 ~ 42838434 (-)
G1626232 LOC106611303 other downstream 1265130 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 1435701 42465705 ~ 42480874 (-)
G1626105 NA other downstream 1650606 42255235 ~ 42255797 (-)
LOC110498001 NA other upstream 2095871 46003765 ~ 46008718 (-)
G1631005 NA other upstream 2711313 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 2922440 46830334 ~ 46830650 (-)
G1632192 LOC106575636 other upstream 4008401 47916295 ~ 47980466 (-)
G1632228 NA other upstream 4060620 47968514 ~ 47970332 (-)

Expression


Co-expression Network