LOC110497950


Basic Information

Item Value
gene id LOC110497950
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 44107330 ~ 44109395 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469747.2
atcgttcttcttgcaaagcatgtaaatgttttaatcaaactattatataaatctgactatccacaataatcacaTTATTGTCTGCATGTAACTGTACTCAATTATGAAACGCAGGTTGTTGTGATCTGTGCCTGTGTTTGAGTGAGTGCACATGTGGGGGAGGGGGACATTTTCAGAGAGCGAGGGAAAGTGAGTGGGAGATGAGTGGAGTAAAGTTTTGAGTTTCAACTTCATTCATtggagtttttttatttttatttttaaatcaaaCTTGGTTCGTGATTGGGCTACGAGATGTGGTCATGTCTAGATTGGATACATATTTTTTCAAACTTTCAACTTCCACTTTTGATTTCTGCGTTCACAAAACACAGGAGATTTTCTGTTTGCACATTCCACTTTTAGACTTTCATCTGAGTATGGCAGCCCAACTAAAATTGGCAAGGTGGCAGATAGTGAATGATTTGAATGAGCCTAATATCAAGGCTATATGTGACAATTTACTAcaaaaaaatgtgatcaataaATTTGAGAGGGACTCCATGACACATAGGATGCTAGACAGGGCAGATATGGCACGACAACTTGTGGACACTGTTATCAGCAAAGGTAACAACGCCTCCACATTAATGATAGAAGCACTGCAACAAGTTGACCAACACCTCTTCAAAGAGATCGAGAGAAACCTTGCGCTGGCCAATCACACTGTAGTCCAGGCTGGTGCTCAGGGTGCTCCGGATGCACCACCAAATTACAATGATTTGATGTGAGAATGACtgaagagaaagacaacagaagTCACAATTTTGTGCCTGGACTCCAGACAACCAGATGACAATGGTGTTGTTTCAGAAACTAACTGTATCTTGATAATGTGCTACCGTTGGtggtttacccaataaattactgggagcttATGTATACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469747.2 True 925 mRNA 0.40 3 44107330 44109395

Neighbor

gene id symbol gene type direction distance location
LOC110497949 LOC106587655 coding downstream 90497 44007318 ~ 44016833 (-)
LOC110497946 LOC106587737 coding downstream 166010 43931473 ~ 43941320 (-)
LOC110497944 LOC106588122 coding downstream 184280 43918670 ~ 43923050 (-)
LOC110497943 LOC106588404 coding downstream 191038 43911187 ~ 43916292 (-)
gpx2 gpx2 coding downstream 199436 43906403 ~ 43907894 (-)
LOC110497951 acp7 coding upstream 26376 44135771 ~ 44160265 (-)
LOC110497952 LOC106587421 coding upstream 58091 44167486 ~ 44186610 (-)
LOC110498363 LOC106587081 coding upstream 122768 44232163 ~ 44399357 (-)
grem1b LOC106586810 coding upstream 393774 44503169 ~ 44505276 (-)
LOC110497957 LOC106586717 coding upstream 409519 44518914 ~ 44529276 (-)
G1627807 NA non-coding downstream 12417 44094598 ~ 44094913 (-)
G1627803 NA non-coding downstream 17724 44089372 ~ 44089606 (-)
G1627800 NA non-coding downstream 20290 44086828 ~ 44087040 (-)
G1627722 NA non-coding downstream 164448 43942646 ~ 43942882 (-)
G1627709 NA non-coding downstream 244858 43862004 ~ 43862472 (-)
G1627894 NA non-coding upstream 63415 44172810 ~ 44174312 (-)
G1627900 NA non-coding upstream 70529 44179924 ~ 44180174 (-)
G1627932 NA non-coding upstream 111336 44220731 ~ 44221039 (-)
G1627945 NA non-coding upstream 117143 44226538 ~ 44226803 (-)
G1628139 NA non-coding upstream 133719 44243114 ~ 44243359 (-)
G1627068 NA other downstream 698221 43408727 ~ 43409109 (-)
G1626324 NA other downstream 1268896 42759294 ~ 42838434 (-)
G1626232 LOC106611303 other downstream 1466057 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 1636628 42465705 ~ 42480874 (-)
G1626105 NA other downstream 1851533 42255235 ~ 42255797 (-)
LOC110498001 NA other upstream 1894370 46003765 ~ 46008718 (-)
G1631005 NA other upstream 2509812 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 2720939 46830334 ~ 46830650 (-)
G1632192 LOC106575636 other upstream 3806900 47916295 ~ 47980466 (-)
G1632228 NA other upstream 3859119 47968514 ~ 47970332 (-)

Expression


Co-expression Network