cyp1c1 (cyp1c1)


Basic Information

Item Value
gene id cyp1c1
gene name cyp1c1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 44986672 ~ 44988391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001185031.1
CCTTTGAAAAGTAAGCTGGACTAAAACTGACTGAGAGTGCTGAAAAAAGTGGAACTTTTTTGTACTGTTCTTTTCTATTCACAATATCTGTCTCCAGGAATAGGTAATAAATCATCTAGAACCATGGCACTGCTGGACACAGAGTTTGAGGTGAagggcagcagcagcatcatcacGGAGTGGAGTGGACAGGTCCAGCCAGCGCTGGTCGCCTCCTTAGTTTTCCTCTTCTGTCTGGAAGCCTGTCTGTGGGTCAGGAATCTCAGACTCAAGAGAAGGCTGCCAGGACCTTTTGCCTGGCCGGTGGTGGGCAATGCCATGCAGCTGGGGCAGATGCCTCATATCACCTTCTCCAAGCTGGCAAAGAAGTACGGCAACGTGTATCAGATAAGACTGGGCTGCAACAACATAGTGGTGCTTAATGGAGACACAGCAATACGAGAAGCCTTGGTTCAGCACAGCACAGAGTTTGCAGGCAGACCTGACTTTGTGTCTTTTCGGATGATTTCAGGAGGCAGGAGCATGACATTCACTAACTACAGCAAACAGTGGAAAATGCACCGGAGAATTGCACAATCTACCATTAGAGCTTTCTCCTCAGCAAACAGCCAGACCAAGAAAGCATTTGAGCAGCACGTTTTAGGAGAATCTATGGATCTTGTGCAGGTATTTCTGAGAATGAGTGCAGATGGACGATATTTTAATCCCGCTCATGAATTTACAGTCGCTGCTGCCAATGTAATCTGTGCCCTGTGCTTTGGAAAACGTTATGGCCATGATGATATTGAGTTTAGAACTCTCCTAGGCAGAATGGACAAGTTTGGAGAGACGGTGGGGGCTGGCAGCTTGGTGGATGTCATGCCCTGGCTTCAGAATTTCCCAAATCCTGTCCGCAGCGTCTACCAGAATTTCAAACACATAAATGAGGAGTTTTTTACCTTTGTGAAAGACAAAGTGGTGCAGCACAGAGAAACCTTCAACCCTGATGTGACCCGGGACATAAGTGATGCTATCATTAATGTGATTGAGCACGGAAAGGACAGTGGACTGACCAAAGACTTCACAGAAGGAACAGTCACAGACCTTATTGGAGCCGGCCAAGACACAATGTCAACCATTTTACAATGGATTCTCCTGCTTTTGATCAAATACCCCATCATCCAAACCAAACTGCAGGAGCAGATTGACAAAGTGGTAGGCCATGACAGGCTGCCCTGTATTGAGGACAAAGCCAACCTGGCTTACCTAGATGCCGTTATCTATGAGACCATGCGCTACACCAGCTTTGTACCCCTCACCATCCCCCATTCCACCACCTCAGATGTTACCATCGAAGGCTTCCACATCCCCAAAGACACAGTGGTCTTCATCAACCAGTGGTCTGTCAACCACGACCCTTTACAGTGGAAGGACCCACATCTCTTTGACCCTTCACGTTTCCTAGATGAAAGCGGTGCTCTTGACAAGGACCTAACTAACAGCGTCATGATCTTCTCCACTGGTAAGAGGCGATGTATTGGCGACCAGATTGCCAAAGTGGAAATCTTTTTATTTACAGCCATCTTGCTTCACCAGTGTACCTTTGAGAGCAACCCCTCAGAGACCCTGACCCTTGGTTGTTCCTATGGGCTCGCACTGAAGCCCCTGTACTACACCATCACAACCAAGCTCAGGGGGAAGCTGCTCGGTCTGGTGTCACCTGCATAAAAATCTCATCCCA

Function

symbol description
cyp1c1 Enables coumarin 7-hydroxylase activity; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; and testosterone 6-beta-hydroxylase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in several structures, including digestive system; eye; gill; heart; and pleuroperitoneal region.

NR:

description
cytochrome P450, family 1, subfamily C, polypeptide 1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K07410 CYP1B1; cytochrome P450 family 1 subfamily B1

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001185031.1 True 1720 mRNA 0.48 1 44986672 44988391

Neighbor

gene id symbol gene type direction distance location
LOC110497958 eif2ak4 coding upstream 426799 44537506 ~ 44559873 (+)
LOC110497955 LOC106586878 coding upstream 484920 44440142 ~ 44501752 (+)
LOC118941479 LOC106586952 coding upstream 556427 44410249 ~ 44430245 (+)
zgc:194887 LOC106587488 coding upstream 819268 44164032 ~ 44167404 (+)
LOC110497948 NA coding upstream 1039998 43944625 ~ 43946674 (+)
cyp1c2 cyp1c2 coding downstream 3077 44991468 ~ 44993957 (+)
LOC110497964 LOC106583112 coding downstream 62769 45051160 ~ 45053552 (+)
LOC110497963 LOC106583053 coding downstream 75846 45064237 ~ 45068205 (+)
LOC110497966 LOC106582786 coding downstream 140624 45129015 ~ 45147200 (+)
LOC110497965 LOC100380739 coding downstream 163135 45151526 ~ 45157970 (+)
G1628781 NA non-coding upstream 15368 44971092 ~ 44971304 (+)
G1628737 NA non-coding upstream 64343 44922098 ~ 44922329 (+)
G1628717 NA non-coding upstream 78165 44908267 ~ 44908507 (+)
G1628708 NA non-coding upstream 85440 44901026 ~ 44901232 (+)
G1628546 NA non-coding upstream 160334 44826022 ~ 44826338 (+)
G1628840 djc17 non-coding downstream 98491 45086882 ~ 45094330 (+)
G1628861 NA non-coding downstream 130061 45118452 ~ 45118655 (+)
LOC110497969 siva1 non-coding downstream 207521 45174289 ~ 45198342 (+)
G1629028 NA non-coding downstream 223502 45211893 ~ 45212120 (+)
LOC110497971 LOC106582637 non-coding downstream 228705 45217001 ~ 45252828 (+)
G1628689 NA other upstream 99499 44886871 ~ 44887173 (+)
G1628550 NA other upstream 100438 44829922 ~ 44886234 (+)
G1628486 NA other upstream 237747 44683362 ~ 44748925 (+)
G1628488 NA other upstream 239226 44688382 ~ 44747446 (+)
G1628073 LOC106610840 other upstream 538000 44414322 ~ 44448672 (+)
G1628865 LOC105030512 other downstream 198571 45186962 ~ 45194241 (+)
LOC110497977 LOC106582390 other downstream 310108 45298446 ~ 45301424 (+)
G1629134 spit1 other downstream 408440 45396831 ~ 45399822 (+)
G1629200 NA other downstream 513403 45501794 ~ 45502263 (+)

Expression


Co-expression Network