bub1bb (LOC106582108)


Basic Information

Item Value
gene id bub1bb
gene name LOC106582108
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 45427075 ~ 45430207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574480.2
GTACATTAAGTCTAGGTTCAAAATATAACTGGCCATCTTCAACCTAGCATTCCGTGAGCGTGCAGCCACATGATAAATGTAGTcctaaaatataaatgtaaagcaaacatattttttttatggaaGATATTATATCTGAATGGTTTTCGTATCCACCGTAAATAATATACTATCGGCGAAAAACACATAGATTTTTTCAAACGAGTTTCTCGTTTACTAACATCGTTGGGTGTGACCATCCAATCATCTTTGTCCAAATCTTCTCGCGGTTCGAGTTCAAAAGACTCAGAGCAACCAGCATGAAAAGGACAACGACCCAGTCCAGTGTTGTTTAACTTTgacaaaaaatatacatattttatcAAGAAAgttgttgaagaaaaaaaataaatctaGCAGGctagctagctgacttaCAGAACCAAAATGGCAGAAGGTGGAGAGGCAGACTGGGAACTTTGCAAAGAGAACATCCAGCCCTTGAAGAAAGGTCGGGCCATATCAGTTTTACACCAGGCACTCAGTCAACAGCAAGAGGGTTCGAGCTCTGCCACCAACCAACACAAACAGGCTTTTGAGTCTGAACTGAGAGTGTATGATGGAGATGACCCCCTTGATGTTTGGGATCGGTATGTTAAATGGACAGAGCAGACCTATCcacagggaggaaaggagagtaaCCTTAATGTGCTTTTGGAGAGAGCTGTGATGTGCTTTACAGAGGAAAATAAATATCACAATGACAGCCGTTATGTTGACCTATGGATCAAATTTGCAGAGAGCGGTCACGAGCCTTTGGATATCTACAGATATATGCGAGCCCAGGGAATAGGAGTACAACAGGCTTCCTTCTACATTGCCTGGTCTGAGGAGTATGAGAATCAGGGTAACTCTCGAACAGCAGACAGTGTCTACCAGGAGGGCTTCAAGCGTGGGGCTGAACCTCTGGAGAAACTCCTGCAGTTCCACAAGGCTTTGCAGGCGCGTGTGTCCCGGCAGGTGATGTCTGGAATGGTGaatgacgaggaggaggaagctGAGGCAGCAAAGCCTGAGCGGGTTTCTCTGGTGGATCTAAAACACAGGGGGAAGAAAAAGGCTGTTGCACCCATTAGTAGAGTTGGTGCAGCACTAAGCAGTAATTCACGAAGCCTACAGTTACAAGGCCCACCAGCTCTGGCCAGCAGTGGTCAAAACAGTTGCCTTGTGATCTTTGATGAGAACAAGGCTGTCAGTGCTGAGCCCTCTGAACTAAAGTTGGAATCTTGGATGGCCCCACCCCCATCGAGATTCAAGGAGAACGAGCAGAGGCCTGAGAAATGGAGCAACGTAAAGATGCCAATGAAGTCCAGGTTTGGTCACAGTGTTGTGGCTCTGCCCAGCAAGCCAAACTTCCAGCCCTTTGTGGAGGAGTCGGATCAGCCTCCAGCTATGACACCGTGTAAGATCAACCCAGCGGTGAATTCAGTGTTGTCTGCACGGAAGCCCTGCGGGGATGAGACTCCTCtgaagagactgcagcaacagcagcaggaaGAGGGGAAAGCTCTGGAGCAGAGCATGTACTGCAAGAAGCTGCTGCTCAGTGGCGCCTCCGAGTTCTGCTTTGAGGAACTGCGGGCTGAGCGCTACCGACAGAAGAAGGCCTTGGAGTCAGGGGGCAGTGGCAAGGAAGAGCAAGCGGGCTCTGGTCTTCCAAACTGACACATTTCAACAAGGACATGTTCAGTGTTTTATTATTAGGTAGCAGACTATCAGTGTCATCATGTATGTATTTTAGAGTTTGTGTATATAAAAAGTTTCAAACTTGTCCACTGTGGGAGTCAAACCCACAAGGgtcatgctctactaactgagccagaCAGGACCACTAATAACA

Function

NR:

description
mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like

GO: NA

KEGG:

id description
K02178 BUB1; checkpoint serine/threonine-protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574480.2 True 1879 mRNA 0.47 9 45427075 45430207

Neighbor

gene id symbol gene type direction distance location
zgc:162989 pp14b coding upstream 5161 45404636 ~ 45421914 (+)
LOC110497977 LOC106582390 coding upstream 125651 45298446 ~ 45301424 (+)
LOC110497973 LOC106583826 coding upstream 130700 45291705 ~ 45296375 (+)
LOC110497972 LOC106582486 coding upstream 135417 45266098 ~ 45291658 (+)
LOC110497971 LOC106582637 coding upstream 174247 45217001 ~ 45252828 (+)
LOC110497981 LOC106581963 coding downstream 14619 45444826 ~ 45470840 (+)
si:dkey-248g15.3 NA coding downstream 203427 45633634 ~ 45635163 (+)
LOC110497986 LOC106581668 coding downstream 232935 45663142 ~ 45672367 (+)
LOC110497988 LOC106581430 coding downstream 254651 45684858 ~ 45720183 (+)
LOC110497992 LOC106581094 coding downstream 363683 45793890 ~ 45798812 (+)
G1629120 NA non-coding upstream 43256 45383524 ~ 45383819 (+)
G1629117 NA non-coding upstream 45535 45381310 ~ 45381540 (+)
G1629115 NA non-coding upstream 46496 45380361 ~ 45380579 (+)
G1629113 NA non-coding upstream 47698 45379043 ~ 45379377 (+)
G1629069 NA non-coding upstream 49455 45310876 ~ 45377620 (+)
G1629152 NA non-coding downstream 11335 45441542 ~ 45442461 (+)
G1629155 NA non-coding downstream 15621 45445828 ~ 45446058 (+)
G1629158 NA non-coding downstream 19019 45449226 ~ 45449440 (+)
G1629166 NA non-coding downstream 28418 45458625 ~ 45458857 (+)
G1629167 NA non-coding downstream 28893 45459100 ~ 45459315 (+)
G1629134 spit1 other upstream 27253 45396831 ~ 45399822 (+)
G1628865 LOC105030512 other upstream 232834 45186962 ~ 45194241 (+)
LOC110497964 LOC106583112 other upstream 373524 45051160 ~ 45053552 (+)
G1628689 NA other upstream 539902 44886871 ~ 44887173 (+)
G1629200 NA other downstream 71587 45501794 ~ 45502263 (+)
G1629210 NA other downstream 85967 45516174 ~ 45516648 (+)
G1629779 LOC106580335 other downstream 583517 46013724 ~ 46016639 (+)
G1629912 NA other downstream 795175 46225382 ~ 46225820 (+)
LOC110498004 LOC106580093 other downstream 827712 46257919 ~ 46318609 (+)

Expression


Co-expression Network