Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941482 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 45535792 ~ 45537427 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037752.1 | True | 615 | mRNA | 0.44 | 2 | 45535792 | 45537427 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498581 | LOC106611608 | coding | downstream | 25778 | 45509268 ~ 45510014 (-) |
| zfyve19 | LOC106582020 | coding | downstream | 108517 | 45423602 ~ 45427275 (-) |
| LOC100136686 | LOC106610865 | coding | downstream | 135480 | 45384358 ~ 45400312 (-) |
| LOC110497976 | LOC106582172 | coding | downstream | 157565 | 45317764 ~ 45378227 (-) |
| xgb | LOC106582340 | coding | downstream | 218179 | 45300133 ~ 45317613 (-) |
| LOC110498366 | plcb2 | coding | upstream | 1561 | 45538988 ~ 45551127 (-) |
| LOC110497982 | LOC106581812 | coding | upstream | 24320 | 45561747 ~ 45613546 (-) |
| mthfd1b | mthfd1 | coding | upstream | 105590 | 45643017 ~ 45662977 (-) |
| LOC118941483 | NA | coding | upstream | 129627 | 45667054 ~ 45668680 (-) |
| LOC110497987 | LOC106581578 | coding | upstream | 135079 | 45672506 ~ 45682662 (-) |
| G1629489 | NA | non-coding | downstream | 50444 | 45484946 ~ 45485348 (-) |
| G1629488 | NA | non-coding | downstream | 51053 | 45484495 ~ 45484739 (-) |
| G1629483 | NA | non-coding | downstream | 55931 | 45479616 ~ 45479861 (-) |
| G1629480 | NA | non-coding | downstream | 59924 | 45475554 ~ 45475868 (-) |
| G1629477 | NA | non-coding | downstream | 67029 | 45468512 ~ 45468763 (-) |
| G1629617 | NA | non-coding | upstream | 185051 | 45722478 ~ 45722775 (-) |
| G1629643 | NA | non-coding | upstream | 191326 | 45728753 ~ 45729051 (-) |
| G1629670 | NA | non-coding | upstream | 253863 | 45791290 ~ 45792023 (-) |
| G1630558 | NA | non-coding | upstream | 268951 | 45806378 ~ 45806579 (-) |
| G1630596 | NA | non-coding | upstream | 322977 | 45860404 ~ 45861600 (-) |
| G1627068 | NA | other | downstream | 2126683 | 43408727 ~ 43409109 (-) |
| G1626324 | NA | other | downstream | 2697358 | 42759294 ~ 42838434 (-) |
| G1626232 | LOC106611303 | other | downstream | 2894519 | 42640449 ~ 42641273 (-) |
| LOC110498355 | atg2b | other | downstream | 3065090 | 42465705 ~ 42480874 (-) |
| G1626105 | NA | other | downstream | 3279995 | 42255235 ~ 42255797 (-) |
| LOC110498001 | NA | other | upstream | 466338 | 46003765 ~ 46008718 (-) |
| G1631005 | NA | other | upstream | 1081780 | 46619207 ~ 46629506 (-) |
| G1631120 | LOC106612182 | other | upstream | 1292907 | 46830334 ~ 46830650 (-) |
| G1632192 | LOC106575636 | other | upstream | 2378868 | 47916295 ~ 47980466 (-) |
| G1632228 | NA | other | upstream | 2431087 | 47968514 ~ 47970332 (-) |
