LOC110498582 (LOC106583554)


Basic Information

Item Value
gene id LOC110498582
gene name LOC106583554
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 46208320 ~ 46209797 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575235.2
GAGAACCAGACACAGCCTGCGCCTGCTGTATCTAGCTATCTACTGAACTCTGACAGAAGTGACAGTGAGAGAGCATCGGCCCTCAGGGAACTGTGAGCTTTCCTACTCAGACAACAGAGAGTGAAGAAAGATCCagctttttgttttttgttttcaaGAACTTTTCACAAACATATTTGGCTCTAACCTCAGTTGCTTTGTGGTTTTAGTTGTTTTTTCCCACTTTCGtgttttacatttattttctAAACATCATTTGTTGAGATGGACTCTGACGCTGGCTCCAACTCCAGCCGCTCCTCATCTCCAGATCTGGTGGTGGATGACTCCATGGGCAGCTTCTTCTCCAACAAGATGTTCCAAGCCTACTGCCGGGAGGAGGGGGCAGCCAGGGCCGCTGGGCAGGGCAGGACTGACCGCTGTGCTGTGGGAGGCAAGAGCAAGACCCTCAAAGAGGGTGACGTGCAGGACCTGAGGCTGAAGGTGAAcggcagggagaggaagaggatgcacGACCTGAACCAGGCCATGGACGGCCTGAGGGAGGTCATGCCCTATGCTCAGGGGCCCTCCGTCCGCAAGCTCTCCAAGATCTCCACCCTGATGTTGGCCCGTAACTACATCCTCATGCTGTCCAGCTCCCTGGAGGAGATGAAGAAGCTGGTGGGGGACGTGTATGGAGGTGGTGGTTCCCAGAGTCGCACTAGCCACCGCCGGATCAACCCTCCGGCCCCCACAGCTCACCTCCCCCTACACCCCCTGGCCCAGTCCCTGCACTCCCTGGTGGGTAGCACGGCCTCGGCTCTCCACCACCCTTCGCCTCTCCCGGCTCCAGCCCCACACTCACCACCCTCTGCAAGCTACCTGGGCTTCCACCATGCACCCGTACAGAGCCTGCTGAAAGACCCTCTCCACCTAGCCAGCTCCTACAGGCACTTTCCTGGTATGCCCTGTCCCTGCTCGCTCTGCCAGCCTCTACCAACCACCGCATCCACCCTGCATAGTTTTTCCATGGGCAAGTGAGCAGGTGACACCCAGGACTGAGCTCTGTAGTTGAGGCCCAGTGCCCACCCCAGGACTAAGTAGTGGACTGAGGACTGAGATAAATTGTTGGTTGAACTGTAAAAAACATTGGTAGCCCCCAGGACCTGTACATATTTTGTATATATCTTCTATTGAGTATTCCGCTGCTATTTTTCTAAATGACATTCCTTGATTATATTGAAAACATTTAAatgcacacacagaaacacttagATAATTTAAGTCAGATAATTTGGTTATGCTTTGTATTTCATACTATTGTTCTTGAAGCTCTTTTTTGAATGTAACAGCTATAATATCTGCTATTGCTATTCAATATCGGAAATTCAGTGTTACTGAAACAAATGACAAAGATGGAAAGTGCTGTGTCCTTCTGCAGGTGTCTTATTTTCCTAAATTAAACcttttaaaaaatacatgttcTGCTGTTTTGC

Function

NR:

description
oligodendrocyte transcription factor 3-like

GO:

id name namespace
GO:0045664 regulation of neuron differentiation biological_process
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575235.2 True 1478 mRNA 0.50 1 46208320 46209797

Neighbor

gene id symbol gene type direction distance location
LOC110498003 LOC106580283 coding downstream 2946 46192730 ~ 46205374 (-)
LOC110498002 LOC106580335 coding downstream 191560 46013720 ~ 46016760 (-)
LOC110498001 NA coding downstream 202284 46003765 ~ 46008718 (-)
LOC118941484 NA coding downstream 206575 45996022 ~ 46001745 (-)
LOC110498000 NA coding downstream 236168 45963081 ~ 45983398 (-)
LOC110498005 arhb coding upstream 123351 46333148 ~ 46415591 (-)
LOC110498006 LOC106579821 coding upstream 210931 46420728 ~ 46449566 (-)
LOC110498008 LOC106579881 coding upstream 251960 46461757 ~ 46472164 (-)
mgst3b LOC106579764 coding upstream 268926 46478723 ~ 46481326 (-)
syf2 syf2 coding upstream 287993 46497790 ~ 46505960 (-)
G1630800 NA non-coding downstream 17005 46190704 ~ 46191315 (-)
G1630793 NA non-coding downstream 35495 46172566 ~ 46172825 (-)
G1630791 NA non-coding downstream 37834 46170119 ~ 46170486 (-)
G1630790 NA non-coding downstream 39246 46168798 ~ 46169074 (-)
G1630782 NA non-coding downstream 52780 46155320 ~ 46155540 (-)
G1630820 NA non-coding upstream 15222 46225019 ~ 46225260 (-)
G1630825 NA non-coding upstream 24534 46234331 ~ 46234882 (-)
G1630857 NA non-coding upstream 84352 46294149 ~ 46294426 (-)
G1630891 NA non-coding upstream 208056 46417853 ~ 46418136 (-)
G1627068 NA other downstream 2799211 43408727 ~ 43409109 (-)
G1626324 NA other downstream 3369886 42759294 ~ 42838434 (-)
G1626232 LOC106611303 other downstream 3567047 42640449 ~ 42641273 (-)
LOC110498355 atg2b other downstream 3737618 42465705 ~ 42480874 (-)
G1631005 NA other upstream 409410 46619207 ~ 46629506 (-)
G1631120 LOC106612182 other upstream 620537 46830334 ~ 46830650 (-)
G1632192 LOC106575636 other upstream 1706498 47916295 ~ 47980466 (-)
G1632228 NA other upstream 1758717 47968514 ~ 47970332 (-)
LOC110498045 LOC106575475 other upstream 1902116 48111907 ~ 48147170 (-)

Expression


Co-expression Network