Gene
RNA
| Item | Value |
|---|---|
| gene id | zbtb8a |
| gene name | zbtb8a |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 46936326 ~ 46940595 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| zbtb8a | Predicted to enable RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in epidermal cell. Orthologous to human ZBTB8A (zinc finger and BTB domain containing 8A). |
| description |
|---|
| zinc finger and BTB domain-containing protein 8A |
| id | name | namespace |
|---|---|---|
| GO:0005488 | binding | molecular_function |
| id | description |
|---|---|
| K10495 | ZBTB8; zinc finger and BTB domain-containing protein 8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021574567.2 | True | 2342 | mRNA | 0.47 | 4 | 46936326 | 46940595 |
46,934,000
46,935,000
46,936,000
46,937,000
46,938,000
46,939,000
46,940,000
46,941,000
46,942,000
46,943,000
46,944,000
46,945,000
46,946,000
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498025 | LOC106578367 | coding | downstream | 620 | 46932146 ~ 46935706 (-) |
| tmem54a | tmem54 | coding | downstream | 65305 | 46858159 ~ 46871021 (-) |
| zgc:154055 | LOC106578739 | coding | downstream | 118082 | 46808960 ~ 46818244 (-) |
| LOC110498016 | LOC106579056 | coding | downstream | 127505 | 46803721 ~ 46808821 (-) |
| srrm1 | srrm1 | coding | downstream | 133265 | 46789732 ~ 46803061 (-) |
| gale | gale | coding | upstream | 678 | 46941273 ~ 46946804 (-) |
| LOC110498027 | LOC106583458 | coding | upstream | 14817 | 46955412 ~ 46960743 (-) |
| LOC110498370 | LOC106577869 | coding | upstream | 42095 | 46982690 ~ 47172799 (-) |
| LOC110498030 | LOC106577595 | coding | upstream | 449209 | 47389804 ~ 47394206 (-) |
| LOC110498031 | nx22a | coding | upstream | 476795 | 47417390 ~ 47447993 (-) |
| G1631121 | NA | non-coding | downstream | 56294 | 46870675 ~ 46880032 (-) |
| G1631118 | NA | non-coding | downstream | 107860 | 46827960 ~ 46828466 (-) |
| LOC110498013 | clic4 | non-coding | downstream | 171927 | 46752022 ~ 46781884 (-) |
| G1631094 | NA | non-coding | downstream | 186589 | 46749155 ~ 46749737 (-) |
| G1631205 | NA | non-coding | upstream | 60579 | 47001174 ~ 47001607 (-) |
| G1631206 | NA | non-coding | upstream | 65089 | 47005684 ~ 47005895 (-) |
| G1631213 | NA | non-coding | upstream | 101397 | 47041992 ~ 47042209 (-) |
| G1631345 | NA | non-coding | upstream | 370960 | 47311555 ~ 47313215 (-) |
| G1631454 | NA | non-coding | upstream | 412129 | 47352724 ~ 47377401 (-) |
| G1631120 | LOC106612182 | other | downstream | 105676 | 46830334 ~ 46830650 (-) |
| G1631005 | NA | other | downstream | 306820 | 46619207 ~ 46629506 (-) |
| LOC110498001 | NA | other | downstream | 930449 | 46003765 ~ 46008718 (-) |
| G1627068 | NA | other | downstream | 3527217 | 43408727 ~ 43409109 (-) |
| G1626324 | NA | other | downstream | 4097892 | 42759294 ~ 42838434 (-) |
| G1632192 | LOC106575636 | other | upstream | 975700 | 47916295 ~ 47980466 (-) |
| G1632228 | NA | other | upstream | 1027919 | 47968514 ~ 47970332 (-) |
| LOC110498045 | LOC106575475 | other | upstream | 1171318 | 48111907 ~ 48147170 (-) |
| LOC110498375 | dlgap2 | other | upstream | 1954935 | 48812312 ~ 48896302 (-) |
| LOC110498059 | LOC106573685 | other | upstream | 2516499 | 49457082 ~ 49460760 (-) |
