LOC110498038 (LOC106576015)


Basic Information

Item Value
gene id LOC110498038
gene name LOC106576015
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 47839885 ~ 47845749 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574582.2
TCATTACACGTGATCCTCTTCTGTAGACCAGGAAGTACCGAGTGCTACAAATCACCACAAACATCACTGAAACTGTAACAGCCAGCAACGTTGTGACAGTTTCCTGTCGCACGTGTTTTCTATCGTATTGTAATAATGGCGGAAGAGGTTTCCTGCTTGAAGGCACGGCTtatggagaaagaaaaagagataGTTGCATTGAAGAATAAACTGGCATTAGAAAAGAACAGTTTGATAGATCTGCAGCTGCAGGAGAAAGTGACAACACTTCCACCTCTGAAACTCAAGGCAACCCTGTCCAATGAAGACATCATGCGCTACAGCAGACAGCTTATACTGCCAGAGTTTGGTGTACAAGGTCAGCTAAACCTCTCCCAGACATCAGTGCTGGTTGTGGGGTGTGGAGGACTAGGCTGTCCCCTGGCACAGTATCTAGCTGCAGCAGGAATCGGGCGTGTGGGTCTTCTGGACTATGACGAGGTGGAACTGAGTAACCTGCACAGACAGGTGCTCCATGGAGAAGACAGCCAGGGACAGGCCAAGGCCCAGtctgctgcccatgctgtcagaAGGTTGAACTCCACAGTAGAATGCATTCCCTACCACCTCCAGCTGTCTCCAGAAAATGCTTTACAGCTCATCCAACAGTACGACATTGTGGCTGACTGTTCGGACAACGTTCCCACCCGGTATCTGGTGAATGATGCCTGTGTCCTCAGTGGCAAGCCCCTAGTATCTGCCAGTGCCCTGAGAATGGAGGGCCAGCTGACAGTGTATAACTACCGTGGAGGCCCCTGCTACAGGTGCCTGTACCCAAAGCCTCCACCCCCAGAGATGGTGACTAACTGCTCTGACGGAGGGATCTTAGGAGTAGTGCCAGGGATCATGGGATGCTTCCAAGCATTGGAGGTCCTGAAGATAGCCTCAGGACAGGGCTCTTCCTGTGGCCAACAGCTGTTGATGTTTGACGCCCAGGATGCCAAGTTCCGGTCCATCAGGCTGCGGTCCAAGCAGGCCAGCTGTGCTGTGTGTGGAGAGAACCCCACTGTCACACACCTTGTAGATTATGAGAAGTTCTGTGGGTCTGCTGCCACAGATAAGTGTCGAAGACTAAACCTTCTCTCCAAAGACCAGAGGGTAACAGTGCAGGAGTATAAATCTATAGTGGACAACACAGCTGCTCATCTCCTGCTGGATGTTCGCCCTCTAGTGGAGGTAGATATATGTCACCTACCCACCTCCCTCAACATCCCTCTATCCAGTTTAGAGGACAGAAAAAGTGAACATATCCGAGTGCTGAAGGAGAGAATtggcagagtgaaagaggagatgTTGAATGAATCCCAGGTCCCAGTATATGTGATCTGTAAGCTGGGTAATGACTCCCAGAAGGCAGTTCAGGTCTTGGAGAAGATGTCAGGCTCTGAAGTGGACTTTGTCACTGTTAAAGACATCTGTGGAGGGCTGATGGCCTGGGCACAGAAGATAGACCCCTCTTTCCCACAGTATTGACTCAACGTCACAGGTTCTGCACTGTGGATTCATGACTTTGTTAATAAACATGTTCATAAATGTCATCATAGCGACCATTTTTCTACCTTGTTTTATGTATGCTGGTTGCATTGGACATggcaaatatgacagacagattAAATTGCAGTTACATCTTAAAGGTGAAAAGTGAAAGAAATAGTCATATCTGCTGTTCATGTTTTCTGggctgtattatatatatatataaccttgtTCCAGATTGTAGAATTTTTATAACCCCAATTCATCGTGAAGGGGATGCATGgtaatatgtgtgtatgtgttaattCATTATGAATTTTTAGCTATTTGTTATTACACATCTATACATTCATAATGTGTTGCCAGTTTGGATAGGAAACAATGAGTAGCTGATGCATGTCAGCATCCTCTCCAAAGCAATATTAGAAGCAACACTGCGACAGTGTAAAGAATAAAGAATGATGACATGT

Function

NR:

description
adenylyltransferase and sulfurtransferase MOCS3-like isoform X1

GO: NA

KEGG:

id description
K11996 MOCS3, UBA4; adenylyltransferase and sulfurtransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574582.2 True 1985 mRNA 0.47 13 47839885 47845749

Neighbor

gene id symbol gene type direction distance location
LOC110498037 LOC106575860 coding downstream 99 47769887 ~ 47839786 (-)
LOC110498035 LOC106576115 coding downstream 92419 47727013 ~ 47747466 (-)
LOC110498033 NA coding downstream 114866 47706502 ~ 47725019 (-)
LOC110498031 nx22a coding downstream 391892 47417390 ~ 47447993 (-)
LOC110498030 LOC106577595 coding downstream 445679 47389804 ~ 47394206 (-)
LOC110498045 LOC106575475 coding upstream 266158 48111907 ~ 48147170 (-)
LOC118941487 NA coding upstream 736352 48582101 ~ 48592024 (-)
LOC110498047 LOC106574998 coding upstream 834430 48680179 ~ 48683751 (-)
LOC110498049 kbtbd11 coding upstream 838798 48684547 ~ 48696699 (-)
LOC110498373 arhgef10 coding upstream 853255 48699004 ~ 48779451 (-)
G1632075 NA non-coding downstream 89179 47749760 ~ 47750706 (-)
G1632083 NA non-coding downstream 103600 47735640 ~ 47736285 (-)
G1631813 NA non-coding downstream 133421 47706241 ~ 47706464 (-)
G1631794 NA non-coding downstream 135951 47703561 ~ 47703934 (-)
G1632179 icef1 non-coding upstream 53419 47899168 ~ 47901334 (-)
G1632227 NA non-coding upstream 122215 47967964 ~ 47968441 (-)
G1632192 LOC106575636 non-coding upstream 131957 47916295 ~ 47980466 (-)
G1632246 NA non-coding upstream 151473 47997222 ~ 47997438 (-)
G1632251 NA non-coding upstream 159827 48005576 ~ 48005843 (-)
G1631120 LOC106612182 other downstream 1009235 46830334 ~ 46830650 (-)
G1631005 NA other downstream 1210379 46619207 ~ 46629506 (-)
LOC110498001 NA other downstream 1834008 46003765 ~ 46008718 (-)
G1627068 NA other downstream 4430776 43408727 ~ 43409109 (-)
G1626324 NA other downstream 5001451 42759294 ~ 42838434 (-)
G1632228 NA other upstream 122765 47968514 ~ 47970332 (-)
LOC110498375 dlgap2 other upstream 1049781 48812312 ~ 48896302 (-)
LOC110498059 LOC106573685 other upstream 1611345 49457082 ~ 49460760 (-)

Expression


Co-expression Network