LOC118941486


Basic Information

Item Value
gene id LOC118941486
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 48160753 ~ 48166744 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036954973.1
TGTACCAACCTCATCGCCAACATGGCCGTGTTTAAAGACGCAGaccccttcttcctctctgagCAGCTGGAGGTGCTGCAGTTTGAGATGTACCACATGGGGGACCTGATCATCCGCTGGGGGGGCTCATGGGAGACTGCATGTATTTCAACAACAGTGGAGCCGTGGAGACTCTGAGCTCAGGTCCACTGAGTCTCACAAAGCTGGGTCCAAAGGGGACAACAAGGACAAAACTGGGTCCAAAGAGGACAATAAGGACAAAACTGGGTCCAAAGTGGACAATAAGGACAAAACTGGGTCCAAAGAGGACAATAAGGACAAAGCTGGGTCCAAAGAGGACAATAAGGACAAAGCTGGGTCCAAAGAGGACAATAAGGACAAAACTGGATCCAAAGAGGACAATAAAGACAAAACTGGGTCCAAAGAGGACAATAAGGACAAAGCTGGGTCCAAAGCGGACAATAAGGACAAAGCTGGGTTCAAAGAGGACAATAAGTACAAAGCTGGGTCCAAAGAGGACAATAAGGACAAAGCTGGATCCAAAGTGGGCAATAGGGGACAATAAGGACAAAGCTGGGTCCAAAGAGGACAATAAGGACAAAACTGGGTCCAAAGAGGACAATAAGGACAAAGCTGGGTCCAAAGAGGACAATAAGGACAAAACTGGGTCCAAAGAGGACAATAAGGACAAAACTGGATCCAAAGTGAGCAATAGGGGACAATAAGGACAAAACTGGGTCCAAAGTGGACAATAGGGGACAATAAGGACAAAGCTGGGTCCAAAGTGGACAATAGGGGACAATAAGGACAAAGCTGGGTCCAAAGTGGACAATAGGGGACAATAAGGACAAAGCTGGGTCCAAAGGGGACAACAAGAACAACAAAGTCCATCCAGTTAAAAATGATTTAAACAAGGATAAAGACTACAAATACCACGTGGTAAGTTTGTTTACTTCTATTTCAAATCAGTGGTTCTTATGTACAGCATATGGGTTGATTTGACCGAATGCGATTGGCtggaaatatattttaaaaatgtttcaaACGATAGCAAAGTTGTACATAACACTGATGCATTTCATTATGCTCCTCACCTTTGGTCATTATTTCACCTCACAAAATATAATCTAGACTTAATATGACAAAACACACAAGCACGTGATAATGTATGTTTGCACTCAGTGTGTGCGCTCACTTTTAAGAGTATATGTGTTTTCAGCTCAAAGGAAGGAAGGCAGGCTCGGCTCTAATGACAGGATCAGTCTCTGGGCTGCAGCCCAGCTAGCTTCGTCTGGCTCAAAGCACACTTGTGACAGAAACACTAATTACACTGCACTGTTCCCTCACCATTCAAATGTCCCAGCACCGGTGTTATTGAAGCTGTTGTGGGCTATTTACTTTGCCATACCATAGTAAAGGAAAGTAAAGGAAACTTTAAACTCATGGACATATAGCTGAATATGCTTAGATAAATTTAAACAAGGGTGTTTTGATACTCTTATTATCCCATTAGCGGCATTTTAAATACTATTGAATCATGGTATTTATTTTCCCAAAAACAAACAGATACCAAGCACCACTCATGCATGAAAAGTTATTTGTGAATGAAGAACAAATCATGTTTGGGTATTATATTTGAGCGTTGTGTTTGTTTCAGCGGAAGGTCATTTTCAGAACCGTGTCCAATTACATTTCTGTTGTTCAAACTGGAGTCGATATCCATGTTTTATGAATAAAAGTGAAAAtggtctgcctgtctccctctcagcCAGCATGTAACACTGATAGGTGAAGTATGTTGTTGTGCTGTTATGAACACACCATGACCATGTCCACGTGAGGTTATTGCTCAGACCCTGAGGTTTTCTCTCTCCGTCCTCACGGCTTCACTAATTTTCTCTGCTGAACGAACAAGGAGATTAAAGAGACCCTGG

Function

NR:

description
PREDICTED: keratin-associated protein 5-5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036954973.1 True 1934 mRNA 0.43 2 48160753 48166744

Neighbor

gene id symbol gene type direction distance location
LOC110498044 LOC106575475 coding upstream 31373 48122225 ~ 48129380 (+)
LOC110498040 LOC106575182 coding upstream 49106 48008094 ~ 48111647 (+)
LOC110498039 LOC106575636 coding upstream 179447 47938145 ~ 47981306 (+)
LOC110498042 icef1 coding upstream 222802 47861863 ~ 47937951 (+)
LOC118941362 LOC106568776 coding upstream 395252 47764384 ~ 47765501 (+)
LOC110498372 LOC106575065 coding downstream 84368 48251112 ~ 48583066 (+)
LOC110498048 NA coding downstream 394822 48561566 ~ 48564328 (+)
LOC110498046 LOC106574720 coding downstream 422200 48588944 ~ 48678169 (+)
LOC110498051 NA coding downstream 620475 48787219 ~ 48792402 (+)
LOC110498053 erich1 coding downstream 962926 49129670 ~ 49155002 (+)
G1632009 NA non-coding upstream 115943 48044503 ~ 48044810 (+)
G1631988 NA non-coding upstream 154711 48005725 ~ 48006042 (+)
G1631975 NA non-coding upstream 201469 47956780 ~ 47959284 (+)
G1631918 NA non-coding upstream 315021 47845061 ~ 47845732 (+)
G1632372 NA non-coding downstream 34175 48200919 ~ 48201175 (+)
G1632373 NA non-coding downstream 67578 48234322 ~ 48234619 (+)
G1632402 NA non-coding downstream 90430 48257174 ~ 48257474 (+)
G1632405 NA non-coding downstream 93691 48260435 ~ 48260654 (+)
G1632408 NA non-coding downstream 97847 48264591 ~ 48264814 (+)
G1631844 NA other upstream 411671 47747697 ~ 47749082 (+)
G1631702 NA other upstream 499518 47660126 ~ 47661235 (+)
LOC110498004 LOC106580093 other upstream 1901105 46257919 ~ 46318609 (+)
G1629912 NA other upstream 1934933 46225382 ~ 46225820 (+)
G1632650 arhgef10 other downstream 532313 48699057 ~ 48700568 (+)
zgc:193593 NA other downstream 997210 49160705 ~ 49178402 (+)
LOC110498072 NA other downstream 1997095 50163645 ~ 50168749 (+)

Expression


Co-expression Network