LOC110498047 (LOC106574998)


Basic Information

Item Value
gene id LOC110498047
gene name LOC106574998
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 48680179 ~ 48683751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574609.2
acttgttctcaacttgcctacctggttaaataaaggtaaaataaaaaaatatccattGACTAAAATACCAATAGGAAGCACTGTAATACATTTGGATATGGTTAGGAAttgatttcattttttaaaatcaattgcaaatgtttttttttataaatagatTTTTCAGACACAGAAGCTGTTTAGTTTCGATTTTATTTTAgcaatttgtattttattgtagCTTTTTTTTACGCTTATTGCTGTACAGATGATGATGATCCAAACTGTATCACATACGGCGGTGATTGAGAgatccatagggcggcgcacaattggcccagcgtcgacaAGGTTTGGTCGGGTAGGCCGTCATAGTTAAGAACCTATTCTTATTTAcacacttgcctagttaaataaaggttacataaaaaaaatgtgtgttcaGGAATGTATTTGTTCTCCAGTCCCTTTAACCTGACGCTATTTTGAATACAGTAGCGGCAGATGTCTTCGCACATAGGCTGGATCACATGGTACGCATAGTGTGTGACGTAGTAGGTTATTGgatagaagaggaagagaagatgtCTACTGCCATCCTAATATAGCAGAAAATAAAAACATCGACCCAATTCATTCTACACTCATCATTTAGCGGTCTAGGCTACAACCACTGCATGGTATTGTTGCATAACGGTCTCAATGGCTGTGGCACATGCGAAACAAACGGTCCTAAATCCGGTGATTCCATTCACTGGGGCCATACCTGGGGGACTACACCCCGGGGAGATAGTCCTTATCCAGGGCACTGTTCACAATGATGCTGACAGGTTCCAGATGGACCTATCCTGTGGCACCAGCACTAAACCTCGTGCGGACATCGCCCTCCACTTCAACCCCCGTTTTAAGGGCTCCCCGTGCGTGGTGTGTAACTCCCTGGTGCAGGAGAGTTGGGGCTGTGAGGAGACCCTTCAGCAGCTGCCCTACAGACAGGGAGCAGCCTTCGAGACGATCATCCTGGTCCATGATGATGTCTTTAAGgtggcagtaaatggTTCTCATTTGTTAGAATACAAGCACAGAATCCCACTGGACAGGATTGACACATTTTCTATATCTGGGAAAGTCAAGGTGCGCTCCATTGGCTTTATACCAAACTCAGCAATATACTCAATCTCAGGTGACCTGAGTCTCCCTTACAAAGGCAGTATACTGAAAGGGGTGAGTCCAGGACAGCACATCACAATCAAGGGACACGTCAGCATGTACCCACACAGCTTCACTGTGAACCTCCGCAACAACGGCAGTGAGAACATCGCTCTGCACCTGAACCCCCGGATGAAGTCGGCCATGTTCATCAGGAACTCCTACCTGAGTGAGTCCTGGGGACCAGAGGAGAGGGAGCTTCCCGTCTTCCCCTTCTCGCCTGGGGAGTACTTTGAGATGCTGATCCTCTGCCAGCCCCACCAGTTCAAGCTGGCGGTGAATGGCTCTCACCTGCTGGAATACAGGCACCGGGTGCAGGACCTGAGCACCATCAACCAGCTGGAGATCATGGGAGACCTGGAGCTGATGGACATCAAGCTGTGGTGACCCATGACAGAGGCAAGCTAGGCCACAATGGGCTAAGCCCTATTCTGGACGACAGGCCCGTTCACAACTCCCCCACCCTGGGCAGTGAGCAGTGCTTGAGCCAGCCTGATTATGGGTTTCAATGTCTGAGCCATGAGGTTTACAGCTGAGGTAGCCTTGGATCTGTTTGAGTGGGTCTACAGGATTTGACAGTAATACTTGTATGCACTATCTGGTGCAAGGGAGGCTGGAATAATGTGTAATGACAGGAGTGTTATAGAAACAGCCCCATTTACACCTTGCGCTAACCTGTGGGTTTTGTGATCTGATCAAGGTTTGTTGCGTCTATACATAGTATTAAAATATCTTATCCATCCGCA

Function

NR:

description
galectin-8-like

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574609.2 True 1931 mRNA 0.47 8 48680179 48683751
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118941487 NA coding downstream 88155 48582101 ~ 48592024 (-)
LOC110498045 LOC106575475 coding downstream 533037 48111907 ~ 48147170 (-)
LOC110498038 LOC106576015 coding downstream 834430 47839885 ~ 47845749 (-)
LOC110498037 LOC106575860 coding downstream 840393 47769887 ~ 47839786 (-)
LOC110498035 LOC106576115 coding downstream 932713 47727013 ~ 47747466 (-)
LOC110498049 kbtbd11 coding upstream 796 48684547 ~ 48696699 (-)
LOC110498373 arhgef10 coding upstream 15253 48699004 ~ 48779451 (-)
LOC110498052 cln8 coding upstream 109487 48791774 ~ 48806154 (-)
LOC110498375 dlgap2 coding upstream 128561 48812312 ~ 48896302 (-)
LOC110498058 LOC106573748 coding upstream 683156 49366907 ~ 49455407 (-)
G1633426 NA non-coding downstream 91792 48588185 ~ 48588387 (-)
G1633415 NA non-coding downstream 102683 48577175 ~ 48577496 (-)
G1633414 NA non-coding downstream 103732 48576237 ~ 48576447 (-)
G1633412 NA non-coding downstream 106037 48573921 ~ 48574142 (-)
G1633520 NA non-coding upstream 100595 48784346 ~ 48837476 (-)
G1633525 NA non-coding upstream 106935 48790686 ~ 48791280 (-)
G1633560 NA non-coding upstream 170841 48854592 ~ 48855059 (-)
G1632192 LOC106575636 other downstream 699713 47916295 ~ 47980466 (-)
G1632228 NA other downstream 709847 47968514 ~ 47970332 (-)
G1631120 LOC106612182 other downstream 1849529 46830334 ~ 46830650 (-)
G1631005 NA other downstream 2050673 46619207 ~ 46629506 (-)
LOC110498059 LOC106573685 other upstream 773343 49457082 ~ 49460760 (-)
G1633961 NA other upstream 875286 49559037 ~ 49560131 (-)
G1634391 NA other upstream 1071960 49755711 ~ 49827902 (-)
LOC110498073 NA other upstream 1506910 50190657 ~ 50193142 (-)

Expression

LOC110498047(LOC106574998) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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LOC110498047(LOC106574998) Expression in each Bioproject

Bar chart with 21 bars.
LOC110498047(LOC106574998) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network