LOC110498051


Basic Information

Item Value
gene id LOC110498051
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 48787219 ~ 48792402 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037764.1
taggctgtcattgtaaataattatttgttcttaaatgacttgcctagttaaataacgttttttatttttttttgtgtccTCCAGGACCCCACACTCTCTTGGTCATAGGAGTCGATGATTCATCATATGACTCCATATAACACTTTTGTGTTTTAGCCAAATGAAAAGGACAGGTACTCAAATTTCAAGAAGAGGTGGAGGGCAGTACCAGCAGCAATAAGGAGAACAGGGAGCAATCAGTTGTTTCCTCCAGAAATGTGTGGATCAATGCCAATAAGAAGAGCAGGGAGCCATCGGTTGCTTCCTCCAGAAATGAGTGGAGATGGCAGATCTGATACCCTCTTCTCTTGGAAGCTCTGGATACAGCTCCCACACAACTACCAGCATCTGACCACTGGTTTGGATCACATAGTTCTGGAACCCTGCCCCTTGAATCTAGAATGGTCTCTCTGACTTCCATCTGAGTGTCTGACTTCAGAGGCCAAAGAGGATTCAAGGAGAAGCCGTGGAGTACTGCGGGTCACTCTGATGTCACTCCATACATTGGGACATGACATAATAAAGATAGATTACATCTGACACTTAACAGAACTGATGGAAAAGTTTGAGAATTACATGCAAAAATTCACTAACAGATGATCAACGTGATACGTTGTAAACTCTTTATTATTGTGTAGTGTAATGCTCATCTAGGGACCAGCACTGATAATTAGAATAAGGTTAAATGTGATGGTAAAATGCATCTGACTTGTGTATTAGATGTTTTAATATTGACATTTCTAGCAGAGGAATAACATACTGCAACAAGTGTTATGCACAGAATTGATCAGTGGTATCAATAGTTTTCATAAAAATCCTTATTTCAGGAAGCTAGTCTGATAAGAGGGACCAACTATGGGCCATGTTGCATGACATAATGAGGTGTTTGTAGGTGAGAAGTTCAggcagaaatatatatttttacggCTTTAATTGGCATTTCATGTTATAGTGAATACTTTGACAGTACCAATGTGTCAGTATGCATCACATAATGGTTTCTTTAGGAGAAATGTAACAGCTACTTAAATAAGTAAATCCAACCAATTTAAGTTCAGAAAAGTATTAATGGCTTAAATTGAAGTTGAAAGGAATTGGATGGAAAAACATAACATACATATTTGCATCAGGTCTAGAAATCATTAAGAACAGAGAAGGTCTAGGTCATAGGCTAGGACTTAGAGGAAAGAACTAGTGAAACAAATGGAACTGTGCCACAATGACTTGTCACCCTTGATAAGTCAAGTAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037764.1 True 1290 mRNA 0.38 3 48787219 48792402

Neighbor

gene id symbol gene type direction distance location
LOC110498046 LOC106574720 coding upstream 109050 48588944 ~ 48678169 (+)
LOC110498372 LOC106575065 coding upstream 204671 48251112 ~ 48583066 (+)
LOC110498048 NA coding upstream 222891 48561566 ~ 48564328 (+)
LOC118941486 NA coding upstream 620475 48160753 ~ 48166744 (+)
LOC110498044 LOC106575475 coding upstream 657839 48122225 ~ 48129380 (+)
LOC110498053 erich1 coding downstream 337268 49129670 ~ 49155002 (+)
zgc:193593 NA coding downstream 368303 49160705 ~ 49178402 (+)
si:ch211-195o20.7 LOC106574021 coding downstream 379048 49171450 ~ 49192439 (+)
LOC110498056 LOC106573945 coding downstream 407691 49200093 ~ 49218555 (+)
LOC110498063 LOC106573328 coding downstream 773454 49565856 ~ 49611711 (+)
G1632645 NA non-coding upstream 113129 48673634 ~ 48674090 (+)
G1632597 NA non-coding upstream 202255 48584750 ~ 48584964 (+)
G1632595 NA non-coding upstream 214406 48572499 ~ 48572813 (+)
G1632594 NA non-coding upstream 214786 48572170 ~ 48572433 (+)
G1632722 NA non-coding downstream 60636 48853038 ~ 48853247 (+)
G1632762 NA non-coding downstream 124175 48916577 ~ 48916897 (+)
G1632764 NA non-coding downstream 130082 48922484 ~ 48922710 (+)
G1632765 NA non-coding downstream 130420 48922822 ~ 48923115 (+)
G1632768 NA non-coding downstream 136926 48929328 ~ 48929659 (+)
G1632650 arhgef10 other upstream 86651 48699057 ~ 48700568 (+)
G1631844 NA other upstream 1038137 47747697 ~ 47749082 (+)
LOC110498072 NA other downstream 1371437 50163645 ~ 50168749 (+)
LOC110498078 LOC106572417 other downstream 1451217 50243497 ~ 50265945 (+)
G1634948 NA other downstream 1814984 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 3782531 52561723 ~ 52576154 (+)

Expression


Co-expression Network