LOC110498074


Basic Information

Item Value
gene id LOC110498074
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50199879 ~ 50201465 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469770.2
CTGGATTTACACTCTACTCATTTACCGTGAGTGGGGAAAATAGCCATAGACAGACAGGTTACGCTACTCACCTAATTGAGGCTAAGAAAGAACCTGACAACATGACTAAAATGGTGATAACTTACATTGGCTTCCTTCTCCTTGCCATGCAGTTATCACAAgtcttctcacaaaatatTAGGCGTAGGCCTACAACAAGGTCCCCGGCGATGACTGTGAACACTACCAAAGTTGCCGGCGGCGCACGTTCCAATATGACCAAGGTACCCGATATTGTCACTACCACCAACATCACCATTCCCAAAGGAGCCTGCGCGTCCTTGCAGTCCAATGCGTTTACGCTGCTCATTCTCATGGTGGCGGGCTCGCTCCTACAGGGCCGCTTATTGAGGGTTCATCTGCACTAAAGACACTGCCACGAATACAATCGGTGGAACAGAACCCCTTTCTGATGGGAATTATTTGGATCACACCTCCCCGGCTATTTCAACCCAGTATAGGCAGGCATACACTCCCTGCTTACTGGCCCTATGGTGTGGTCCCCTCAATGGCGGCAGGCCATGAGGATGTACTGAACTCTGCTTTTTGACTCTGTTGGTTCCAGTGTCCAGACAGCAGGCTGTCGTTTTGGACTGTTTTGTAACTTCTGAAGCTAAATGTTTGCTGTGCCTGGGAAATCAACTGCATATAATGTTGGTTGAGATGCGTTCTGTAATTAATGTAACCTATATTTTTGTCTGGCACTTGAGTCCAAGCTCCAACCTGGGTTTGAACCAGTGACCATCTGAACACAACTGCCTCTCACCATTAACCAGCTAGTCATTTCACACCTGTTACACTTGCTATTTCTACTCCTGAAACTGCAATGTATACTTTGTCAAAGGCTTGATATACTCTTGTGATTTGTAGAATAGCTACATTTTATATGTTAAGTTCTCAACTTTTGATTTTAACTTAAGCGGTGATGTAATATGCTTAGATTTATTTTGTATTGCCAGATTTAATAAAGCTATGACATTTACTATTAATATTCAATGTTGTACAATAAAATGAATAACACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469770.2 True 1062 mRNA 0.43 2 50199879 50201465

Neighbor

gene id symbol gene type direction distance location
LOC110498073 NA coding downstream 6737 50190657 ~ 50193142 (-)
LOC110498070 LOC106572824 coding downstream 99001 50072530 ~ 50100878 (-)
LOC110498062 NA coding downstream 634102 49534488 ~ 49565777 (-)
LOC118941488 NA coding downstream 667602 49530925 ~ 49532277 (-)
LOC110498061 LOC106573499 coding downstream 676514 49475673 ~ 49523365 (-)
LOC110498075 LOC106572210 coding upstream 18732 50220197 ~ 50243409 (-)
LOC110498378 LOC106572116 coding upstream 133817 50335282 ~ 50342425 (-)
LOC110498079 LOC106571863 coding upstream 176653 50378118 ~ 50465911 (-)
LOC110498084 LOC106571704 coding upstream 324767 50526232 ~ 50563596 (-)
LOC118941377 NA coding upstream 362751 50564216 ~ 50571402 (-)
G1634651 NA non-coding downstream 5225 50194352 ~ 50194654 (-)
G1634637 NA non-coding downstream 20282 50179356 ~ 50179597 (-)
G1634629 NA non-coding downstream 34959 50163290 ~ 50164920 (-)
G1634628 NA non-coding downstream 38009 50161656 ~ 50161870 (-)
G1634680 NA non-coding upstream 62073 50263538 ~ 50265840 (-)
G1634683 NA non-coding upstream 66176 50267641 ~ 50267941 (-)
G1634761 NA non-coding upstream 97736 50299201 ~ 50299507 (-)
G1634763 NA non-coding upstream 101300 50302765 ~ 50302989 (-)
G1634773 NA non-coding upstream 118181 50319646 ~ 50319872 (-)
G1634391 NA other downstream 375421 49755711 ~ 49827902 (-)
G1633961 NA other downstream 639748 49559037 ~ 49560131 (-)
LOC110498059 LOC106573685 other downstream 739182 49457082 ~ 49460760 (-)
LOC110498375 dlgap2 other downstream 1303913 48812312 ~ 48896302 (-)
G1634769 LOC106571989 other upstream 108245 50309710 ~ 50309971 (-)
LOC118941489 LOC106571589 other upstream 376194 50577645 ~ 50582403 (-)
LOC110498085 LOC106571499 other upstream 424058 50625461 ~ 50636974 (-)
ush2a ush2a other upstream 621516 50685344 ~ 51171781 (-)

Expression


Co-expression Network