iars2 (iars2)


Basic Information

Item Value
gene id iars2
gene name iars2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50203069 ~ 50219807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955016.1
tggtatgtgttaattgtaggggtgcccatggggctggggatcagaaatgtcccgtgcgagagaggcaggttgaggtttccagtgATAGAGTAGTACAGAAGTtgtcgtatgctgaggcagtgaagaaagtagaacAAGATTTGGTTAAGGGGGAGGGatctgagaggagtggtgtgagtagtagatctgtaccagtacagagggatggaccaacaagtgatatatgtttcagtaagattggacTTTTGGCATTTATAgtaatggttatcaactgtacagcAGGGATGGAACGTAAGTCGCAGAAAATAGAGTTTGTGGTTGCAGCTGCggagaggtatgtgtgtgtgcgagacACAGGGTGTGTCAAGTGGTtgtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTACATgcatttaaatagtggagtatggCATTTATTATTCTTTTTGTTTgtgtagtgttagatggtagggtatttttttagattttttttagattaaaaaaacacaaatttaagtataagggagttatactccagtttagtaggtggcggtaatgcaacatttattggatgccaaccgccgttgAACCTAATCGAAGAAAACAACTAATTTGGCCTTTCACAGTTTCCGTAGTAGTGTGTTACGTCCAGTACTTCCGGAAAACAAGAAAAAAACGATCCAATGCTCTAAAGGGTCGCAATCAGATCGATCACAACAACAAACCTGTTTTAGAATTTTGGTAGGTAGAATAGTACGAAGTGTTTGCCTCTCCATGCTGCTGTGCCGCATTTCAGCAGTGAGCCAGAGCGTAGCGAGATGGGGAACGAGTGTTCGGAGAGGCGCCCTTCTCCACCCCGCACTCTCCTTCAACACCAGCCGTTGTCAAAATGTCAGCTCCACCGAAGGTACGGTTCACCCTGCAGCCGCCCAGGGTGCCGGGCCGTACCGCGACAGTGTGTTGCTTCCCCGTACTGAATTCCCCATGAAACTAACCGGACAGAATCTCATAGACCGGGAGGTACAGATACAACAGGAGTGTGGCTTTGCAGAACTCTActcatggcagagagagaggaaggccaAGAAGGAATACTGTCTCCACGATGGCCCCCCATACGCCAACGGGGACCCACATGTGGGACATGCCCTCAATAAGATCCTCAAAGACATCCAGAACCGCTTTGAGATGCTGAGGGGGAAACAGGTTCACTATGTCCCAGGCTGGGACTGCCATGGGCTGCCCATTGAGCTGAAGGCACTGGGAGAGCTGGGAACCAGTGGACTGAGCCCTCTGCAGATAAGACAGAAAGCTCGGGAGTTTGCGGAGGGGGCGATCGCTCGTCAGCGTGCTGCCTTCCAGCGCTGGGGTGTGATGGCGGACTGGGATAAGTGCTACTACACCTTTGATGGGACTTATGAGGCAGCTCAGCTTAAGGTCTTCCAGGACATGCACAGCAAGGGTCTGATCTACCAGGACTACAAGCCAGTtttctggtctccctcctccaggacagctCTTGCGGAGGCAGAGTTGGAGTATAACCCACAGCACGTGAGCAAAGCAATCTACGCCACCTTTGCCCTGGCCACCCTACCCCCTAAGATGGCGGAAGCTGTAGGGGAGTTGGGCAGCATTTCTGTGTTGGTGTGGACCACCCAACCATGGACCATCCCAGCCAACCAGGCTGTCTGCTTTATGCCCAATGCCCAGTACTCAGTAGTGAAGAGGAGAGACAGCTCACAGCTCCTCCTAGTGGCCACTGAGCGCGTTTCCAGCCTGGCAACACTGCTGAGCACAGAGCTGGAGAGTGTGGGCACTTTCACAGGTACAGAACTTGAGGGAGGAGTCTGCCAGCATCCCACCATTCCCAAGAAGGAGGTTCCATTGCTTCCAGCTAATTTTGTAACCATGGGCAAAGGAACGGGATTGGTTCACACAGCTCCTGCCCATGGGATGGAGGACTACAGTGTGGCCTCCCACTTTAAACTATCAGTGGAGTGTATCGTGGATGAGGAAGGCAGGTTCACTGAGCTggctgggcctgagctacagagTCTGTCTGTGATGGGGGAGGGCAATGATACAGTGATCTCCATGCTGAAGGCTGTCGGTTCTCTAGTGAAGGAGGAGGAGTGTGTCCACAGTTACCCATACGACTGGAGGAGTAAAGAGCCTGTAGTCATCAGACCCAGCAAACAGTGGTTCATTGACATCGCCAGCCTCAAAGACAAGGCCAAGGAAGTGCTGGCTAAGGTGCGTGTGATCCCAGAATCGGCGAGGGGCAGTCTGTTGGCCCACCTGGACCGAAGACCGTACTGGTGTATCTCACGCCAGAGGAGCTGGGGTGTGCCCATACCTGTGTTCTACCACAAGGAGACAGGAGAGCCTCTCATTAACAAGCACACTGTATCCCATGTGACCCAGCTGTTCTCAGAGAAGGGCAGTGACTGCTGGTGGGAGCTGCCCCTGGAATCTCTACTGCCACCAGAGGTGCTCAAGAAGagtaAAGCAGGAGAGGTAACAGACTACGAGCGTGGAGATGATGTGTTGGACATCTGGTTTGACAGTGGAACCTCCTGGGCTGCTGTTCTTGGAGAAATGAAGGAGGAGAGTGACACTGACTCTGAGTCACGGCTCAGCTGGCTCCCTTCCTCCCTACGCAAACCCCTGGTGCCAGACTCGAGGGCTGATGTGTATGTGGAGGGAAAGGACCAGATAGGTGGTTGGTTCCAGTCCTCTCTGCTCACCAGTGTTGCCGTGCAGAAAAGGGCTCCCTACAAggctctGATGATACATGACTTTGTGATAagcgagaaaggagagaagatgtCCAAGTCTTTAGGCAACATAGTAGACCCCGATACAGTCATCCACGGGGGGGAGGACCCCAGTGTGTCTCCTGCCTATGGAGTGGATGTGTTGCGTTGGTGGGTGGCAGAGTCCAACGTCTTCTCTGAGGTCCAGATCGGCCCCAACGTGCTCAACTCAGCCAGAGACAGCATCAATAAGTTGAGGAATACCCTGAAGTTCTTGCTAGGGAATCTGCAGGGTTTTGACCCTCGTACTCAGGCAGTGGACCCTAAAGAAATGCACTACATCGACCAGTACCTACTGCACCTTCTACGGAACTACAGTATGAAGATGACAGATGCCTACAATGATTTTGGTGCGGGCAGGGCCATCCGCCTGCTCCAAGCCTTCATCACCAGAGACCTCTCCAAGTTCTACTTCAGCATCATCAAGGACAGgctgTACTGTGATCCTGAGGACTCGTTGGGTCGGCGGTCCTGTCAGACGGTTCtagaggagattctggacggagTGACGCGCTCCATCGCTCCTATCCTACCTCACCTGGCCGAAGAGGTCTATTTACACGCCCCAGGACATAACGAGGGGGAGACCCTGTTCAGGAGTGGCTGGATTAAGAGCAGTCCTGTGTGGCGTAGGCCGGGATTGGAGGAAGCCGTGGAGGGGGCATGCGCTATCAGGGATTCCTTCCTGTCCTCTATCCCAGGACGCAATGCAGCCGAGTATGAGCTGACCATAGAGATTGAGCCTGGCCTACTGTTTGAACTCATTGAGtctctccaAGACGAACctacttcctcttcctctcagcTAACAGAGCTGATGATGTCATCGCAGACAACCCTGACTAGCGCCCTGCCCAGAGACCTGCCCGCTGATGCCCTCATCAGCAATGGCAGTTTCCTCATCAACCTTGAGGGTGGGGTTATCCGTGAGGACAGTGCTTACCAAGTAGCGGCAGTGCCCACCTCCATGGCCCGGTGCCCGAGGTGCCGACGGTACACCTCAAGCTCTCCAGACTGCCCCTGCCCCCGCTGCCAGACCATCCTTACTAGGGCGCAGTGACACGTCCGCCCGCACCATCACAACTTGCAAATTGCCGTCTAACCCGGTCTGTCTGCTTGAACTGACTCCAGACAACCAGGGGTCAACCAAGAAAGACCCTGCTTAGCAACGCACTGAGAGGGGTAACAGCGACAGCCAGACTGTCTGAGTTACCTAAATGACATCTTTCTTCAGCTCTTCAGCTGACATTGACTCTGGCATGTTGCCGCGTGAGGATGGGATGCTTTACAAGACAGGCTTCGTAAAACAAAGCACACATTTTATTTTGATAGAGGGAATTGTCATAAGAGCTATGCAGTACTTTTGAGTTCATAAGACACCTCTCCCAAAGAAGGGCACATCAGTGATGTTTCCTAGAAAGGGACATGTATTGATAGTCCTGGATCCCTCCTATGAGGCACAGAGTGCAGTAATATACCTACTAAGAGAATCAAGTCAGATTATTGTATGTATTAGAAGGATATATAGGGGATGGTACAACACTGAGCgcttagttttttttatttgtattcatGTTTAATGATAATCTGTTTAGTTCTCCTGTCCACTTGTACGAAATCTATTAAATAAAGGACGATCATTAAAATAC
>XM_036955017.1
gttaattgtaggggtgcccatggggctggggatcagaaatgtcccgtgcgagagaggcaggttgaggtttccagtgATAGAGTAGTACAGAAGTtgtcgtatgctgaggcagtgaagaaagtagaacAAGATTTGGTTAAGGGGGAGGGatctgagaggagtggtgtgagtagtagatctgtaccagtacagagggatggaccaacaagtgatatatgtttcagtaagattggacTTTTGGCATTTATAgtaatggttatcaactgtacagcAGGGATGGAACGTAAGTCGCAGAAAATAGAGTTTGTGGTTGCAGCTGCggagaggtatgtgtgtgtgcgagacACAGGGTGTGTCAAGTGGTtgtgtcccatcctttcaggctGTTGGCCTGAAGTAGGACTACATgcatttaaatagtggagtatggCATTTATTATTCTTTTTGTTTgtgtagtgttagatggtagggtatttttttagattttttttagattaaaaaaacacaaatttaagtataagggagttatactccagtttagtaggtggcggtaatgcaacatttattggatgccaaccgccgttgAACCTAATCGAAGAAAACAACTAATTTGGCCTTTCACAGTTTCCGTAGTAGTGTGTTACGTCCAGTACTTCCGGAAAACAAGAAAAAAACGATCCAATGCTCTAAAGGGTCGCAATCAGATCGATCACAACAACAAACCTGTTTTAGAATTTTGGTAGGTAGAATAGTACGAAGTGTTTGCCTCTCCATGCTGCTGTGCCGCATTTCAGCAGTGAGCCAGAGCGTAGCGAGATGGGGAACGAGTGTTCGGAGAGGCGCCCTTCTCCACCCCGCACTCTCCTTCAACACCAGCCGTTGTCAAAATGTCAGCTCCACCGAAGGTACGGTTCACCCTGCAGCCGCCCAGGGTGCCGGGCCGTACCGCGACAGTGTGTTGCTTCCCCGTACTGAATTCCCCATGAAACTAACCGGACAGAATCTCATAGACCGGGAGGTACAGATACAACAGGAGTGTGGCTTTGCAGAACTCTActcatggcagagagagaggaaggccaAGAAGGAATACTGTCTCCACGATGGCCCCCCATACGCCAACGGGGACCCACATGTGGGACATGCCCTCAATAAGATCCTCAAAGACATCCAGAACCGCTTTGAGATGCTGAGGGGGAAACAGGTTCACTATGTCCCAGGCTGGGACTGCCATGGGCTGCCCATTGAGCTGAAGGCACTGGGAGAGCTGGGAACCAGTGGACTGAGCCCTCTGCAGATAAGACAGAAAGCTCGGGAGTTTGCGGAGGGGGCGATCGCTCGTCAGCGTGCTGCCTTCCAGCGCTGGGGTGTGATGGCGGACTGGGATAAGTGCTACTACACCTTTGATGGGACTTATGAGGCAGCTCAGCTTAAGGTCTTCCAGGACATGCACAGCAAGGGTCTGATCTACCAGGACTACAAGCCAGTtttctggtctccctcctccaggacagctCTTGCGGAGGCAGAGTTGGAGTATAACCCACAGCACGTGAGCAAAGCAATCTACGCCACCTTTGCCCTGGCCACCCTACCCCCTAAGATGGCGGAAGCTGTAGGGGAGTTGGGCAGCATTTCTGTGTTGGTGTGGACCACCCAACCATGGACCATCCCAGCCAACCAGGCTGTCTGCTTTATGCCCAATGCCCAGTACTCAGTAGTGAAGAGGAGAGACAGCTCACAGCTCCTCCTAGTGGCCACTGAGCGCGTTTCCAGCCTGGCAACACTGCTGAGCACAGAGCTGGAGAGTGTGGGCACTTTCACAGGTACAGAACTTGAGGGAGGAGTCTGCCAGCATCCCACCATTCCCAAGAAGGAGGTTCCATTGCTTCCAGCTAATTTTGTAACCATGGGCAAAGGAACGGGATTGGTTCACACAGCTCCTGCCCATGGGATGGAGGACTACAGTGTGGCCTCCCACTTTAAACTATCAGTGGAGTGTATCGTGGATGAGGAAGGCAGGTTCACTGAGCTggctgggcctgagctacagagTCTGTCTGTGATGGGGGAGGGCAATGATACAGTGATCTCCATGCTGAAGGCTGTCGGTTCTCTAGTGAAGGAGGAGGAGTGTGTCCACAGTTACCCATACGACTGGAGGAGTAAAGAGCCTGTAGTCATCAGACCCAGCAAACAGTGGTTCATTGACATCGCCAGCCTCAAAGACAAGGCCAAGGAAGTGCTGGCTAAGGTGCGTGTGATCCCAGAATCGGCGAGGGGCAGTCTGTTGGCCCACCTGGACCGAAGACCGTACTGGTGTATCTCACGCCAGAGGAGCTGGGGTGTGCCCATACCTGTGTTCTACCACAAGGAGACAGGAGAGCCTCTCATTAACAAGCACACTGTATCCCATGTGACCCAGCTGTTCTCAGAGAAGGGCAGTGACTGCTGGTGGGAGCTGCCCCTGGAATCTCTACTGCCACCAGAGGTGCTCAAGAAGagtaAAGCAGGAGAGGTAACAGACTACGAGCGTGGAGATGATGTGTTGGACATCTGGTTTGACAGTGGAACCTCCTGGGCTGCTGTTCTTGGAGACTCGAGGGCTGATGTGTATGTGGAGGGAAAGGACCAGATAGGTGGTTGGTTCCAGTCCTCTCTGCTCACCAGTGTTGCCGTGCAGAAAAGGGCTCCCTACAAggctctGATGATACATGACTTTGTGATAagcgagaaaggagagaagatgtCCAAGTCTTTAGGCAACATAGTAGACCCCGATACAGTCATCCACGGGGGGGAGGACCCCAGTGTGTCTCCTGCCTATGGAGTGGATGTGTTGCGTTGGTGGGTGGCAGAGTCCAACGTCTTCTCTGAGGTCCAGATCGGCCCCAACGTGCTCAACTCAGCCAGAGACAGCATCAATAAGTTGAGGAATACCCTGAAGTTCTTGCTAGGGAATCTGCAGGGTTTTGACCCTCGTACTCAGGCAGTGGACCCTAAAGAAATGCACTACATCGACCAGTACCTACTGCACCTTCTACGGAACTACAGTATGAAGATGACAGATGCCTACAATGATTTTGGTGCGGGCAGGGCCATCCGCCTGCTCCAAGCCTTCATCACCAGAGACCTCTCCAAGTTCTACTTCAGCATCATCAAGGACAGgctgTACTGTGATCCTGAGGACTCGTTGGGTCGGCGGTCCTGTCAGACGGTTCtagaggagattctggacggagTGACGCGCTCCATCGCTCCTATCCTACCTCACCTGGCCGAAGAGGTCTATTTACACGCCCCAGGACATAACGAGGGGGAGACCCTGTTCAGGAGTGGCTGGATTAAGAGCAGTCCTGTGTGGCGTAGGCCGGGATTGGAGGAAGCCGTGGAGGGGGCATGCGCTATCAGGGATTCCTTCCTGTCCTCTATCCCAGGACGCAATGCAGCCGAGTATGAGCTGACCATAGAGATTGAGCCTGGCCTACTGTTTGAACTCATTGAGtctctccaAGACGAACctacttcctcttcctctcagcTAACAGAGCTGATGATGTCATCGCAGACAACCCTGACTAGCGCCCTGCCCAGAGACCTGCCCGCTGATGCCCTCATCAGCAATGGCAGTTTCCTCATCAACCTTGAGGGTGGGGTTATCCGTGAGGACAGTGCTTACCAAGTAGCGGCAGTGCCCACCTCCATGGCCCGGTGCCCGAGGTGCCGACGGTACACCTCAAGCTCTCCAGACTGCCCCTGCCCCCGCTGCCAGACCATCCTTACTAGGGCGCAGTGACACGTCCGCCCGCACCATCACAACTTGCAAATTGCCGTCTAACCCGGTCTGTCTGCTTGAACTGACTCCAGACAACCAGGGGTCAACCAAGAAAGACCCTGCTTAGCAACGCACTGAGAGGGGTAACAGCGACAGCCAGACTGTCTGAGTTACCTAAATGACATCTTTCTTCAGCTCTTCAGCTGACATTGACTCTGGCATGTTGCCGCGTGAGGATGGGATGCTTTACAAGACAGGCTTCGTAAAACAAAGCACACATTTTATTTTGATAGAGGGAATTGTCATAAGAGCTATGCAGTACTTTTGAGTTCATAAGACACCTCTCCCAAAGAAGGGCA

Function

symbol description
iars2 Predicted to enable isoleucine-tRNA ligase activity. Predicted to be involved in isoleucyl-tRNA aminoacylation and mitochondrial translation. Predicted to act upstream of or within tRNA aminoacylation for protein translation. Predicted to be active in mitochondrion. Orthologous to human IARS2 (isoleucyl-tRNA synthetase 2, mitochondrial).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K01870 IARS, ileS; isoleucyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955016.1 False 4475 mRNA 0.51 22 50203069 50219807
XM_036955017.1 True 4135 mRNA 0.52 21 50203077 50219556

Neighbor

gene id symbol gene type direction distance location
LOC110498072 NA coding upstream 34320 50163645 ~ 50168749 (+)
LOC110498069 LOC106572557 coding upstream 58420 50088266 ~ 50144649 (+)
zgc:113142 LOC106570820 coding upstream 134687 50037765 ~ 50068382 (+)
LOC110498067 LOC106572928 coding upstream 178560 49927704 ~ 50024509 (+)
LOC110498066 LOC106573019 coding upstream 276324 49754968 ~ 49926745 (+)
LOC110498078 LOC106572417 coding downstream 23690 50243497 ~ 50265945 (+)
LOC110498377 LOC106571989 coding downstream 52237 50272044 ~ 50335206 (+)
LOC110498080 LOC106571921 coding downstream 137818 50357625 ~ 50378113 (+)
LOC110498081 NA coding downstream 216891 50436698 ~ 50437783 (+)
LOC118941376 NA coding downstream 295115 50514922 ~ 50516672 (+)
G1634334 NA non-coding upstream 10880 50190679 ~ 50192189 (+)
G1634333 NA non-coding upstream 13017 50189825 ~ 50190052 (+)
G1634329 NA non-coding upstream 17921 50184915 ~ 50185148 (+)
G1634324 NA non-coding upstream 23584 50179263 ~ 50179485 (+)
G1634322 NA non-coding upstream 25015 50177262 ~ 50178054 (+)
G1634359 LOC106572210 non-coding downstream 18683 50238490 ~ 50241199 (+)
G1634681 NA non-coding downstream 47831 50267638 ~ 50268044 (+)
G1634693 NA non-coding downstream 53796 50273603 ~ 50274264 (+)
G1634705 NA non-coding downstream 69330 50289137 ~ 50289357 (+)
G1634712 NA non-coding downstream 77028 50296835 ~ 50297054 (+)
zgc:193593 NA other upstream 1024667 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 1502501 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 1524914 48588944 ~ 48678169 (+)
LOC110498372 LOC106575065 other upstream 1623413 48251112 ~ 48583066 (+)
G1634948 NA other downstream 387579 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2355126 52561723 ~ 52576154 (+)
G1637065 NA other downstream 2530793 52750600 ~ 52755474 (+)
G1637178 NA other downstream 2697530 52917337 ~ 52918478 (+)

Expression


Co-expression Network