LOC110498081


Basic Information

Item Value
gene id LOC110498081
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50436698 ~ 50437783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469773.2
TGTCAGCTGAGCTGGCACAGGTTAGAGTACCAAGACTGAGCAATCCCACAGCGTGAGCTGTGATTGCGAATAGTTTAGACTAAGCAAACCCACAGCGTGAGCTGTGATTGCGAATAGTTATTGAATTTCTGaccataccacgtggagcattggctacacggctggaaatggttcaactctgagactatcgaacCCTACCGAATAAGAGaaaatcttagatactaattactagtctgcagctagaaattatgtaaaCCTGGGATGTgaataccgacaaccgccgaaacatctatctaTGAGAATATTTCTGAATGGTACCCTGAAGTATCCATCTAACCATGAAAGAATTTGATCTTcagggaaacagaaagagagagagagacttggaattctccagcagacggaccggaCTCCAACAGAGAAGATCACGACACATGggtTCCACACTGAgatttgtgcagataaccaacactttacgacgtttggaatgagactgacgggagAGTTCCCCTCCGAATGGTCGCTGACTGGCTTCATGGCCTGTGTGCTGGATCTTTGTTGCTGTGGTGACATGGCCCTCCAGTCATTTCTGACACTGTGATTGGAGAAGGTCCAAGAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469773.2 True 620 mRNA 0.46 3 50436698 50437783

Neighbor

gene id symbol gene type direction distance location
LOC110498080 LOC106571921 coding upstream 58585 50357625 ~ 50378113 (+)
LOC110498377 LOC106571989 coding upstream 101492 50272044 ~ 50335206 (+)
LOC110498078 LOC106572417 coding upstream 170753 50243497 ~ 50265945 (+)
iars2 iars2 coding upstream 216891 50203069 ~ 50219807 (+)
LOC110498072 NA coding upstream 267949 50163645 ~ 50168749 (+)
LOC118941376 NA coding downstream 77139 50514922 ~ 50516672 (+)
heatr4 heatr4 coding downstream 82612 50520395 ~ 50526363 (+)
LOC118936464 adf1 coding downstream 89158 50526941 ~ 50529343 (+)
LOC110498087 LOC106571300 coding downstream 222189 50659972 ~ 50680974 (+)
LOC110498383 LOC106570236 coding downstream 1504609 51942392 ~ 51992547 (+)
G1634828 NA non-coding upstream 27650 50408773 ~ 50409048 (+)
G1634827 NA non-coding upstream 29171 50407321 ~ 50407527 (+)
G1634821 NA non-coding upstream 40425 50396069 ~ 50396273 (+)
G1634802 LOC106571863 non-coding upstream 56500 50378224 ~ 50380198 (+)
G1634794 NA non-coding upstream 84407 50352090 ~ 50352291 (+)
G1634939 LOC106571589 non-coding downstream 139887 50577670 ~ 50582425 (+)
G1634979 NA non-coding downstream 243865 50681648 ~ 50683147 (+)
G1634983 NA non-coding downstream 245744 50683527 ~ 50684117 (+)
G1634990 ush2a non-coding downstream 258442 50696225 ~ 50696968 (+)
zgc:193593 NA other upstream 1258296 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 1736130 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 1758543 48588944 ~ 48678169 (+)
G1634948 NA other downstream 169603 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2137150 52561723 ~ 52576154 (+)
G1637065 NA other downstream 2312817 52750600 ~ 52755474 (+)
G1637178 NA other downstream 2479554 52917337 ~ 52918478 (+)
G1637730 NA other downstream 2992221 53430004 ~ 53430560 (+)

Expression


Co-expression Network