LOC110498384 (LOC106570052)


Basic Information

Item Value
gene id LOC110498384
gene name LOC106570052
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52004125 ~ 52035886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955040.1
GGCTGCAGTTGTACTCTTCTCACTGTAATGCGTGGTCTGGTCTGTCATTGGTCCTGGTGAGGGTTTATAACGTGAGATGTCACCAGCGGAGTGAGGGTAGGGTGTTTTTTCTCTCTTGTTGACAGGATTATCATCTCAGTGCTTTAACACACCGCCAAACCGCAGATCACATGTCGGGAACGGTTCTGTTCGCTATTACAATGTAGTAGTGAAGTGGAATAAGAAAAACAGCTTTACCTATACAACGGAAGGTATTTGTATGACGACAAGACCCCGAAGTGACAACGTCAATAATTCTGAGACCATGAACTACGTGGGCCAGTTGGCGGGCCAGGTGTTTGTGCAGGTGAAGGAGCTGTACCGGGGCCTGAACCCGGCCACCCTGTCGGGCTGCATCGATGTTATTGTGGTGCGTCAGCCTGACGGCACCCTGCAGTGCTCGCCCTTCCACGTTCGCTTCGGCAAGATGGGTGTGCTGCGCTCCCGTGAGAAAGTGGTGGACATAGAGATCAATGGAGAGCCTGTGAGTCTACAAATGAAGCTGGGGGAGAACGGAGAGGCCTTTTTTGTCAAGGAGACAGAGAACACACTGGAAGGGATTCCGTCCTACCTGGCAACGTCACCTATTGTGTCCCAGGGGGTGGAGCTAATGGAAGCCCAGCTGGGGAAGGGCATGTCTCGCCTCTCTGACCCCGCCTCCCTCTCGGTCCAGACCCTGAGCTCCCAGCAGAccataggaggaggaggagggatgatgatgaaaaagaggaggaagaggaggaagaaagcGCGGGAGAGCGGAGGAGGGAGGCGGGAAGAGAGTGGGGAGCACTCAGAGGATGAGGACATGTTCACCATCGATATGAGCACTGATGAGGAGCAAGAGCACAATAACAACTCCAGCAGGGCCTCTACTCCAGAGTTTGATGAAGAGCAGGGGCCTAAGGCCAGTGTGTTGAGCAGCACCTACACCCAGAACACAACATACACAATACCTGACGCAGACTGGGCACACTCGCAGAGCGGTGGTCTGTCCATCTCCTGTCCACAGCAgacttctctcttcccttctccgaTCAGCGACCCAGGCGGCTCCAGCCCCTCAACTCCGAAGAGTGACTCAGAGCTGACCAATCAGAGCAAAGACAACCCTGAGATGATGTGGGCCTGGGGAGAGCTGCCACAAGCTGccaagccCTCCTTCTTCCCTCCGTTCCAGATGCAAGATTCTTTGATGATGTCCCCTGTCACCATCCCTGTGTGTGATAGCACACACTTCAGAACCATCACTGGAGACGGTGGCCCCTCTGATCAGATCCAGTCCCAGAGCCAAAAAGACAGCGCCCCCCCGTCCCTCACCCTGTACGTTCCACAGCCCGAGGACAACATAGCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCCGGATCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGGGCCGGGTCTGGGGTCGGCTCTGGAGCAGGGTCTGGGGCCGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCCGGAGCAGGGTCTGAGGCCGGGTCTTGGGCTGGGTCTGGGGCCGGGTCTTGGGCTGGGTCTGGGGCCGGGTGTGGGGCCAGGTCTTGGCctggaggagacatggaggaagTATGGGCAGcctgtagagaggtggagggactgGTGGCCTCCAGGATGCTGTCAGAACTGGATGAGGGGTGCCATAGGGACAACACGGTCAGACACACAGACTCCCCATCTAAGAGGAAAGACAAGAGGAGCCACCACCTGGGCTCTGATGGAATCTACCTGGATGACATCACTGAGCTGGAGCCAGATGTGGCCGCTCTCTACTTCCCCAAAAGTGACGGGGGCGGTTCGGTGAGAGGTGGCTTGGAAACGGGAGTGCGGAGTGCCAACCAATCCCCTCAGTCGGTGAGCAGCAGTGGGATGGACAGCGGCGTGGACAGCTACTCTGACCAGCTGGGAGACATGCCCAACATCGCCATCTCCCTGTGTGGAGGTCTCACTGACAACAGAGAGATCACAAGAGAACAGTTTGAGGAGAGAGCCATCTCTTACCAGCAGTTCACTGAGAACCCCTCCATCATTGACGATCCCAACCTGGTGGTCAAGATAGGAACCAAGTACTATAACTGGACCACTGCAGCCCCTCTGATGCTGGCTATGCAGGTGTATCAGAAGCCCCTGCCAATGGCCTCAGTGGAGAACATCATGAAGGAGAAGATGCCCAAGAAAGGAGGCCGCTGGTGGTTCTCATGGCGCAGCAGGAACAGCGATTCCAAATCGGACTCCGTGTCTGAGACGGGAGTTGGAGATGAGGGTGAGACCTCTCTCAGCATGGCTTCAGTCAACGGAATGAAGGAGGAGTCTTCCTCCAGCGATGAGGACCACAGATTGTCCAATCAGGGCTCAGAATCCTGCAACGCCGAACCCCTTCTCACACCCGGTAGTGTGTGCTACAGGAAGACCCTCAGACTGACCCCAGAGCAGCTGGCCAGTCTGCAGTTGAAGGTGGGTCCTAATGAGGTGGTGTTCAGTGTGACCACTCAGTACCAGGGCACCTGCCGCTGCCAGGGCACCATCTACCTCTGGAGCTGGGACGACAAGATCATCATCTCAGACATTGACGGCACCatcaccagGTCGGACACCCTGGGCCACATTCTACCCACGCTGGGTAAAGACTGGACGCATCAGGGCATTGCCCGCCTCTACCACCGAGTCAGCCAgaaTGGTTATAAGTTTATGTACTGCTCAGCGAGGGCCATAGGTATGGCTGATATGACGAGGGGGTATCTACACTGGGTCAACGAGAGAGGAACCATGCTGCCTATTGGACCTGTCCTACTCAGCCCCAGCAGTCTGTTCTCAGCTCTGCACAGGGAGGTGATAGAGAAGAAGCCTGAGAGGTTTAAGATCCAGTGTCTGACCGACGTGAAGCAGCTGTTCCACCCCAACACTGAGCCTTTCTACGCAGCCTTCGGCAACAGAGCCACGgaTGTGTATTCCTATAAGGAGGTGGGCGTTCCCCTAAACAGGATCTTCACAGTCAACCCCAAGGGAGAGCTGATACAGGAACACGCTAAGACCAACATCTCATCGTATGGTGGCCTGTGTGAGGTGGTGGACCACGTCTTTCCCCTGTTGATTAGAGGCCACGTCTCTGACGTCTCCTGCCCTGACACCTTCAGCCAGTTCACCTACTGGAGAGAACAGCTGCCCCAGGTCCACATCCCTGACCAGGTCCACATCCCTGACCAGGTCCACAGCCCAGACCACCCACAGGTCCACAGCCCCAAGTCCACAGCCCCGACCAGCCCCAAGTCCACAGCGCCAACCAGCCCCTGGACAACAGCTGAGGAGACCCCACACCACATCAGACCACCCCAGGAGTGAGCTGTGTGCAATCacggaagggaagggagagacacGCTCAAACTCATAATGATGCAGGCATGCAAATGCAAGAAGCATGTATCTGCTctaatgccacacacacacacagctatgcaGAGGCAGACCTTGCACTAGTGAAAGTGTACTTGCTACAACAACAGGCATGTTAGCACTGAGTGGTATTTATATGTAGTCATCATTTATATTTATGTTTTACTCTTCAGTGTTGTTTTCTCTGCATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACAATACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGTCTACTGTTCATCaggtgaaatacagtgccttgtaaaagtattcaccccccttggcttTTTTCCTATttcgttgcattacaacctgtaatttaaatttatttttatttgga
>XM_036955041.1
GGCTGCAGTTGTACTCTTCTCACTGTAATGCGTGGTCTGGTCTGTCATTGGTCCTGGTGAGGGTTTATAACGTGAGATGTCACCAGCGGAGTGAGGGTAGGGTGTTTTTTCTCTCTTGTTGACAGGATTATCATCTCAGTGCTTTAACACACCGCCAAACCGCAGATCACATGTCGGGAACGGTTCTGTTCGCTATTACAATGTAGTAGTGAAGTGGAATAAGAAAAACAGCTTTACCTATACAACGGAAGGTATTTGTATGACGACAAGACCCCGAAGTGACAACGTCAATAATTCTGAGACCATGAACTACGTGGGCCAGTTGGCGGGCCAGGTGTTTGTGCAGGTGAAGGAGCTGTACCGGGGCCTGAACCCGGCCACCCTGTCGGGCTGCATCGATGTTATTGTGGTGCGTCAGCCTGACGGCACCCTGCAGTGCTCGCCCTTCCACGTTCGCTTCGGCAAGATGGGTGTGCTGCGCTCCCGTGAGAAAGTGGTGGACATAGAGATCAATGGAGAGCCTGTGAGTCTACAAATGAAGCTGGGGGAGAACGGAGAGGCCTTTTTTGTCAAGGAGACAGAGAACACACTGGAAGGGATTCCGTCCTACCTGGCAACGTCACCTATTGTGTCCCAGGGGGTGGAGCTAATGGAAGCCCAGCTGGGGAAGGGCATGTCTCGCCTCTCTGACCCCGCCTCCCTCTCGGTCCAGACCCTGAGCTCCCAGCAGAccataggaggaggaggagggatgatgatgaaaaagaggaggaagaggaggaagaaagcGCGGGAGAGCGGAGGAGGGAGGCGGGAAGAGAGTGGGGAGCACTCAGAGGATGAGGACATGTTCACCATCGATATGAGCACTGATGAGGAGCAAGAGCACAATAACAACTCCAGCAGGGCCTCTACTCCAGAGTTTGATGAAGAGCAGGGGCCTAAGGCCAGTGTGTTGAGCAGCACCTACACCCAGAACACAACATACACAATACCTGACGCAGACTGGGCACACTCGCAGAGCGGTGGTCTGTCCATCTCCTGTCCACAGCAgacttctctcttcccttctccgaTCAGCGACCCAGGCGGCTCCAGCCCCTCAACTCCGAAGAGTGACTCAGAGCTGACCAATCAGAGCAAAGACAACCCTGAGATGATGTGGGCCTGGGGAGAGCTGCCACAAGCTGccaagccCTCCTTCTTCCCTCCGTTCCAGATGCAAGATTCTTTGATGATGTCCCCTGTCACCATCCCTGTGTGTGATAGCACACACTTCAGAACCATCACTGGAGACGGTGGCCCCTCTGATCAGATCCAGTCCCAGAGCCAAAAAGACAGCGCCCCCCCGTCCCTCACCCTGTACGTTCCACAGCCCGAGGACAACATAGCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCCGGATCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGGGCCGGGTCTGGGGTCGGCTCTGGAGCAGGGTCTGGGGCCGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCTGGAGCAGGGTCTGGGGCCGGGTCTGGAGCAGGGTCCGGAGCAGGGTCTGAGGCCGGGTCTTGGGCTGGGTCTGGGGCCGGGTCTTGGGCTGGGTCTGGGGCCGGGTGTGGGGCCAGGTCTTGGCctggaggagacatggaggaagTATGGGCAGcctgtagagaggtggagggactgGTGGCCTCCAGGATGCTGTCAGAACTGGATGAGGGGTGCCATAGGGACAACACGGTCAGACACACAGACTCCCCATCTAAGAGGAAAGACAAGAGGAGCCACCACCTGGGCTCTGATGGAATCTACCTGGATGACATCACTGAGCTGGAGCCAGATGTGGCCGCTCTCTACTTCCCCAAAAGTGACGGGGGCGGTTCGGTGAGAGGTGGCTTGGAAACGGGAGTGCGGAGTGCCAACCAATCCCCTCAGTCGGTGAGCAGCAGTGGGATGGACAGCGGCGTGGACAGCTACTCTGACCAGCTGGGAGACATGCCCAACATCGCCATCTCCCTGTGTGGAGGTCTCACTGACAACAGAGAGATCACAAGAGAACAGTTTGAGGAGAGAGCCATCTCTTACCAGCAGTTCACTGAGAACCCCTCCATCATTGACGATCCCAACCTGGTGGTCAAGATAGGAACCAAGTACTATAACTGGACCACTGCAGCCCCTCTGATGCTGGCTATGCAGGTGTATCAGAAGCCCCTGCCAATGGCCTCAGTGGAGAACATCATGAAGGAGAAGATGCCCAAGAAAGGAGGCCGCTGGTGGTTCTCATGGCGCAGCAGGAACAGCGATTCCAAATCGGACTCCGTGTCTGAGACGGGAGTTGGAGATGAGGGTGAGACCTCTCTCAGCATGGCTTCAGTCAACGGAATGAAGGAGGAGTCTTCCTCCAGCGATGAGGACCACAGATTGTCCAATCAGGGCTCAGAATCCTGCAACGCCGAACCCCTTCTCACACCCGGTAGTGTGTGCTACAGGAAGACCCTCAGACTGACCCCAGAGCAGCTGGCCAGTCTGCAGTTGAAGGTGGGTCCTAATGAGGTGGTGTTCAGTGTGACCACTCAGTACCAGGGCACCTGCCGCTGCCAGGGCACCATCTACCTCTGGAGCTGGGACGACAAGATCATCATCTCAGACATTGACGGCACCatcaccagGTCGGACACCCTGGGCCACATTCTACCCACGCTGGGTAAAGACTGGACGCATCAGGGCATTGCCCGCCTCTACCACCGAGTCAGCCAgaaTGGTTATAAGTTTATGTACTGCTCAGCGAGGGCCATAGGTATGGCTGATATGACGAGGGGGTATCTACACTGGGTCAACGAGAGAGGAACCATGCTGCCTATTGGACCTGTCCTACTCAGCCCCAGCAGTCTGTTCTCAGCTCTGCACAGGGAGGTGATAGAGAAGAAGCCTGAGAGGTTTAAGATCCAGTGTCTGACCGACGTGAAGCAGCTGTTCCACCCCAACACTGAGCCTTTCTACGCAGCCTTCGGCAACAGAGCCACGgaTGTGTATTCCTATAAGGAGGTGGGCGTTCCCCTAAACAGGATCTTCACAGTCAACCCCAAGGGAGAGCTGATACAGGAACACGCTAAGACCAACATCTCATCGTATGGTGGCCTGTGTGAGGTGGTGGACCACGTCTTTCCCCTGTTGATTAGAGGCCACGTCTCTGACGTCTCCTGCCCTGACACCTTCAGCCAGTTCACCTACTGGAGAGAACAGCTGCCCCAGGTCCACAGCCCAGACCACCCACAGGTCCACAGCCCCAAGTCCACAGCCCCGACCAGCCCCAAGTCCACAGCGCCAACCAGCCCCTGGACAACAGCTGAGGAGACCCCACACCACATCAGACCACCCCAGGAGTGAGCTGTGTGCAATCacggaagggaagggagagacacGCTCAAACTCATAATGATGCAGGCATGCAAATGCAAGAAGCATGTATCTGCTctaatgccacacacacacacagctatgcaGAGGCAGACCTTGCACTAGTGAAAGTGTACTTGCTACAACAACAGGCATGTTAGCACTGAGTGGTATTTATATGTAGTCATCATTTATATTTATGTTTTACTCTTCAGTGTTGTTTTCTCTGCATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACAATACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACGGCCTACTGTTCATCAGGTGAAATAGGTACATTACCTAGCCTACTCATACACAGTCTACTGTTCATCaggtgaaatacagtgccttgtaaaagtattcaccccccttggcttTTTTCCTATttcgttgcattacaacctgtaatttaaatttatttttatttgga

Function

NR:

description
PREDICTED: phosphatidate phosphatase LPIN1-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955040.1 False 4493 mRNA 0.54 21 52004125 52035886
XM_036955041.1 True 4457 mRNA 0.54 22 52004125 52035886

Neighbor

gene id symbol gene type direction distance location
LOC110498383 LOC106570236 coding upstream 11578 51942392 ~ 51992547 (+)
LOC110498087 LOC106571300 coding upstream 1323151 50659972 ~ 50680974 (+)
LOC118936464 adf1 coding upstream 1474782 50526941 ~ 50529343 (+)
heatr4 heatr4 coding upstream 1477762 50520395 ~ 50526363 (+)
LOC118941376 NA coding upstream 1487453 50514922 ~ 50516672 (+)
tfb2m tfb2m coding downstream 71756 52107642 ~ 52118171 (+)
LOC110498094 LOC106569575 coding downstream 82582 52118468 ~ 52150151 (+)
hnrnpua hnrnpu coding downstream 525837 52561723 ~ 52576154 (+)
LOC110498099 LOC106568712 coding downstream 548232 52584118 ~ 52600076 (+)
LOC110498100 LOC106568224 coding downstream 576710 52612596 ~ 52646892 (+)
G1636311 NA non-coding upstream 39451 51957567 ~ 51964674 (+)
G1636305 NA non-coding upstream 55972 51947494 ~ 51948153 (+)
G1636269 NA non-coding upstream 105616 51895405 ~ 51898509 (+)
G1636250 NA non-coding upstream 139474 51864449 ~ 51864651 (+)
G1636327 NA non-coding downstream 63682 52099568 ~ 52101728 (+)
G1636390 NA non-coding downstream 108836 52144722 ~ 52146545 (+)
G1636396 NA non-coding downstream 119405 52155291 ~ 52156011 (+)
G1636442 NA non-coding downstream 253025 52288911 ~ 52291793 (+)
G1636452 NA non-coding downstream 268799 52304685 ~ 52635036 (+)
G1634948 NA other upstream 1393646 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 1748873 50243497 ~ 50265945 (+)
LOC110498072 NA other upstream 1836739 50163645 ~ 50168749 (+)
zgc:193593 NA other upstream 2825723 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 3303557 48699057 ~ 48700568 (+)
G1637065 NA other downstream 714714 52750600 ~ 52755474 (+)
G1637178 NA other downstream 881451 52917337 ~ 52918478 (+)
G1637730 NA other downstream 1394118 53430004 ~ 53430560 (+)
G1638710 NA other downstream 2138910 54174796 ~ 54175130 (+)

Expression


Co-expression Network