LOC110498099 (LOC106568712)


Basic Information

Item Value
gene id LOC110498099
gene name LOC106568712
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52584118 ~ 52600076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574683.2
AGCTACTTCCGCATTGTTGTCACTCCCCCTCCACAGCTACTGTTGACCCTGCTGCATACTCGCTTGAAACCACCAACTCATCTGCCATCCCGGGGATACTTGTCTTTTAAATACAGTTTGTTTGCAAGCCAAGTTAGCGCTCTTCTCGTCCTTGCTGCTTTAGGAGTTCTGGTGAGTCCGCAGCCACTGCTGGCCATGGAGCGAGGAAGCGGGTTTTCATTCATGAAGTATGGGACGGCAGTGTCTCTTGCGGTGGTTCTGCTGGCGTACTGGTTCCGACCTCCCGGGGATTCAAGGCTGGATGACCGGTTGGACACAGTGCTGTCCTCCCTGCTGCGGGCTGAAAGCAAAGTGGGGATTAACAACGCCAGACCCAGGGTGGCGATAGGTTTAGGGGGTTGTGTAGACATCCTCGTGGACGGGGTGAGGTTGCTGAATAAGATCGGCCTGCCACCCACAAACCAGCCTCTCCATCATGACTACATAGAGAACGCTGATCAGCTGGCACAGAGCTTCGCTTACTTCTTCGTCCCGGGAGCCGCTGCAGAGCGGTTTGTGATGAACAACACCCTGTTCAGTCAGCTGGTCGAGACATCTCGTGAGTTGCCCGGCAACCGCTGGTCCATAGGTGGCAACGCCCCAGTGATGGCTGGTCGAATGGCAACCGAGGGCTGCGACGTGTTGTTAGGGGGGAGCTTTAGCCCTGACTTCGCTGATGTACTGTCCCAGCACATCACAGTTGCAGGTAATGTGGTGGAGGAGCCTGATATCCATCTGATCCTGGAGTACCCATCTGGAGCCACCTGGGGCCAGTACACCGCCCGCAGGGCCAACAGgtacATAGTCCACAGTGATGACCATAACCCATACCTAGCGTCACTGGAGGACTTTGAGGATAAGCTGCAGGACTTCCATCCTGACCTGCTGGTGATGGGTGGGCTCCAAATGATGGACAgcttccccttccaacaggGTGAGAGGAAAAACCTGCTCTCTCGGCTGGgcaatctcctctcctcctcctcccctcggACGGGCGTCCATTTTGAGATGGCCAGCTTTGTGGATGAGGGTCTAATGGGGGACCTGCTGCGTCTGGTCCTGCCCAATGCCGACTCCCTGGGGATGAACGAGCAGGAGCTGCCCAACCTGCTCAGCCTGTTGAGGGGCTCTAACGTCACCGTActctctgaccctaacccccgCGTTGCAACCGTCCTCGACCAGATGAGGGAGCTCTACCGCCTGGTCAACCAGCGCTACCGCGATGCTAATGAGGATAGCGGCGTGGACGCTAATTCAGCTAGCGCTAAAGGCCGGCCGCTGTCCAGGCTCCACGTGCACACGTTGGCGTTCCAGGCCATGATTGTGACGCGTGGCTCCCAGTGGAAGAACACCATGTCGGCCGTGGCCAAGGCCTCGCTTACCGCCAACCGCCACGTGTGCGGCTCACCGGACATCGACCCCAGCAAGGCGCGGCTCATCATGGACGAGTCATTCTCTGTGAGCCGACAGGAGGGCAGCCAGCGGATCCCTCTAGAGGAGACCAGGCCTGTCAGCTGCTGGGACGAGGATGACTATGAGATCTGTGTGGCGCCCAACCTGGTGTGCACAGATGTTTACCAGACTGCAGGGGGAGGGGACAACATCTCTGCCGCAGGACTGGTGCTGCAGATCTGAGCCAACTTTAGGGACCAACGGCTAACTCTAACAAAGAGATCCCCTAACATGTGAAGTCTTTTATCATTCTGGTTTTAGGTGTGTTGTTTATTGTGTTGCCGGTGCAATGCAAACGCTGGGTGCAGTGTGTCTGGCAGGGCTGAGCCTATTCCTCTTCTGTGCTTTTAgctgtcctctgcctcctctttctcctgtcctctctctgagcAGTATGACctgacacatccacacacactcatacactctctcaTTCCATCAGGTGGAGCTCATCTCATAATCTCACTCATCATATGGGACCTATTTCCTCAACCAGGGCCACGTTCCGTAGCcaaatgttgcagatagaaataccACGAATAGAGCCGACGTGATTCCTTACTCTACATGTCGGAGGCATATTTGTTCTACATAGAAATATGCTATCTGAATATCCAAAATGCCCCCATGTGTTTTTTTCCTTTGACGTGTGTGTTTGTCAGGTGTGTTAAGGTCCAGACACTGATCACATACACGTCACACATCCACTCCCTGTTGAacattacatatatacatatatggtgTCCATAGCTGTTCCATTCTGTCCCAGGATACACGCACAAAACAAACATTCCATCAGTTTCACCATTTCAGCCGTAACGTTCTGTTTCTTTCGTCAAGGGAattttcaattgtttttttctcaaGGGAAAGCTTTTGtttgatatctgactgttttcaTGTTAACCTGATTTAGAGCTGGTGGCATACAGGCATTTATCTCATGTGTCTAGCTAAGCAGTAGAAAAGGGAATTTAAATGTGTTAGCTCAGTGTTGTGTGATGATTCTTCCTCAGTCTGGCCTGTACACATAATGCACTGTAATGTGGTCGTCTTCAGTCTGAATACTATGTAATGATTGATGACAACCACAGGGAGTGTTTCTCTGTTATGTCTGTATTGTGAAAGAGAAACTTTTTTTTACCCTTAACATGAGCATGTATTCTTCTCATAACCTCCTCACTCTCCATATACTGCCTGCATCCTATCATATCATTGAGTCATACATACATTAGGCTCTTAAGTTGTGTGTTTGAATGATTATTGCATGGGCCACATACAAGGCGCTTTGGATAAATGCATCTGCAAATTAAGTATGATATATCAGCCAAACAAGTTTGTTTTATTTAGATGTACTTTCTCTGCAGAACAGCCCATATGATCTCTTTACctgggcccatattcataaagctTCTCGGAGTAGGAGTAATAATCTAGGATCAGTTATCTTTTAGCTCATAGGCAATTGATTAAGTTTACATGGACCGGGgttaacctgatcctagatcagcacttctactatGAAACTccttatgaatacaggccctgttcTGAAGGGAGACTGGGTGCATCCTAACAGTCTAAAGTGGCTTTCTCTCCTTGTTTCCTTTATTGAATTGGCACTGATCAGAAAGAACTACGTCTATCCCCAATCACAGACGTTGAGATGAGTGCAGATGGAAGGGAGGAAGCCGCTGTGTACTACTGACATGCAGCATGAAGCCTGTATGCTTGACAGGGTTTCTCCACTGTCCTCTTAAGGCGGCTGGATTTATTTCCAGACAGAACACCATGCCACTCCAAGCTGAGTCCACCCCTCTGGGTGACtgacgtgcgtgcgtgtgtgttcctGCTTCTCGGCAACTGCTTGTACACACCCAtgctgtgtgtgcgtatgtatttGCGTGAGTGTGCATGCTTTCAGAATATATTTGTGCGAgtgaatgaatgtgtgtgttgctCTGGCCAGCTGATGTAATTGTTGTCTCAGGGATTAGCTGACCTGTGCTGTTAAGGAGATGTGGAATATCTGGGTCCTGCTTTGTGGAGGCTCTGGGATAGACCCTTCCAGATGGATCGCAGTACATGGAAGGAAGGATGGCTCATGGCCAGGTGAATTGTTTTGCTCTGAGTGACTTGGGCGAAATAAAGAAACACACATTCCATCTT

Function

NR:

description
ADP-dependent glucokinase-like

GO: NA

KEGG:

id description
K08074 ADPGK; ADP-dependent glucokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574683.2 True 3666 mRNA 0.50 6 52584118 52600076

Neighbor

gene id symbol gene type direction distance location
hnrnpua hnrnpu coding upstream 8006 52561723 ~ 52576154 (+)
LOC110498094 LOC106569575 coding upstream 433967 52118468 ~ 52150151 (+)
tfb2m tfb2m coding upstream 465947 52107642 ~ 52118171 (+)
LOC110498384 LOC106570052 coding upstream 548232 52004125 ~ 52035886 (+)
LOC110498383 LOC106570236 coding upstream 591571 51942392 ~ 51992547 (+)
LOC110498100 LOC106568224 coding downstream 12520 52612596 ~ 52646892 (+)
LOC110498105 LOC106567684 coding downstream 195244 52795320 ~ 52835776 (+)
LOC110498109 1433b coding downstream 446169 53046245 ~ 53061764 (+)
LOC110498110 LOC106566892 coding downstream 466741 53066817 ~ 53097965 (+)
LOC110498111 NA coding downstream 506605 53106681 ~ 53113452 (+)
G1636483 NA non-coding upstream 194024 52388786 ~ 52390094 (+)
G1636468 NA non-coding upstream 228875 52349604 ~ 52355243 (+)
G1636460 NA non-coding upstream 254929 52323997 ~ 52329189 (+)
G1636442 NA non-coding upstream 292325 52288911 ~ 52291793 (+)
G1636396 NA non-coding upstream 428107 52155291 ~ 52156011 (+)
G1636602 NA non-coding downstream 59232 52659308 ~ 52661396 (+)
G1636601 NA non-coding downstream 61638 52661714 ~ 52663784 (+)
G1636620 NA non-coding downstream 74525 52674601 ~ 52674995 (+)
G1636629 NA non-coding downstream 82204 52682280 ~ 52685726 (+)
G1636658 NA non-coding downstream 121504 52721580 ~ 52722677 (+)
G1634948 NA other upstream 1973639 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 2328866 50243497 ~ 50265945 (+)
LOC110498072 NA other upstream 2416732 50163645 ~ 50168749 (+)
zgc:193593 NA other upstream 3405716 49160705 ~ 49178402 (+)
G1637065 NA other downstream 150524 52750600 ~ 52755474 (+)
G1637178 NA other downstream 317261 52917337 ~ 52918478 (+)
G1637730 NA other downstream 829928 53430004 ~ 53430560 (+)
G1638710 NA other downstream 1574720 54174796 ~ 54175130 (+)
G1638780 NA other downstream 1640180 54240256 ~ 54240751 (+)

Expression


Co-expression Network