LOC110498110 (LOC106566892)


Basic Information

Item Value
gene id LOC110498110
gene name LOC106566892
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 53066817 ~ 53097965 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955074.1
GGATTAAGAAGTGAGTACACGCAAATGCTAACAGGAATAGTAAGGGGGTATATGGCCTATATCTGCCAATATCTTCAACTACACCAGTGATGGGATGATTGGTACAACAGTCATTGACGAGAGAACCAGAATATCCAACATAAAACTAATTTTACCTCGGTGCTACACCTGCTCTGCCTAGCCTGGTTAACGGTTCCTGTGTTGACATTATTCAACAACTTGCAATAATGACACAGGTGGAGTAAGCGCTTTTAACGTCATGATGAAGTATCTGGTACTTGTGACCTTTTTGGCTCCTTGTTGGGTCAATTGTGCGATTAAATCAAGGGCCACTGAGGAAGAAACACGGGAAAATGACACAGAGTTCGAGGCTCTGAGCTCATTGCTGTCTGACTTTGAGGTGCTGCCCGTGTCCGGCCTCCAGCAGCACTCACTCAGGAAGAGGGACGTCCACACAGAGTCCCAGCTGGAGCGCATTGTCAGCTTCAGTGCCCTCAAGAGACATTTTAAGCTTTACTTGACAACTAACACAGACTTGTTCACTGAGGACTTCAAAGCTGTGTTTGTAGATAAGCAAGGGAAGGAAGACCGCTATGATGTTCAGCTGCAGAACTACTTTACCGGACATCTTGTAGGCGAGGAGCACTCCCGTGTTCAGGCACACATAGACGGGGACGAGTTCTCGGCCCACAtcctgacagaggagacagagtacAACATAGAGcccctTTGGAGGTTCACCGAGGTGCCCCCCGATGGCCGTCTGTTGGTATATCGCTCTGAGGACATCCGGAACCTCAGTCGCCTGGCCTCGCCCAAAGTGTGTGGATACATCCACGCTGGGGCCCAGGACCTGCTACCAGAGGCCGCCAGAGGTGGAGAGGCACGGGAGgATTCCctccacagagagaagagagtgaccCACAACCACAAGAAGAACACCTGTCCTCTAGCCCTGGTGGCCGACTACCGCTTCTTCAAACACATGGGCCGCGGAGAGGAGAGCATTACACTCAACTACCTGATTGAGTTGATTGACAGAGTGGACGACATGTACAGGAACACAACCTGGGATGACGAGTTTACAGGATACGGTGTTCAGATCCAACAGATCATCATCAACAAGGAGCCGACCAGAGCGCCGCTTGGCCAGGCTGGGCCGGACTGGACCCACTACAACATGAAGGGAAGCCCCATCCAAGGCAAGGAGGTGTGGGACGTCAAGAAACTGCTGGAACAATTTAGCACAGACATAGCGGACAATGCTAGCACCGTGTGCCTTGCCCACCTGTTCACCTATCAGGACTTTGATGAGGGGACACTGGGCTTGGCTTACGTGGCCCCTTCTAAAGCCCAGGCTATGGGGGGCCTCTGCCCTAAACCTTTCTTTCCATCTAGTTCCGTTAAGAACCCCAGTTTCCTCAACACTGGTTTAACCAGCACTAAGAATTATGGCAAAACCATTCTAACCAAGGAAGCAGATTTGGTGACAACCCATGAGCTGGGCCACAACTTTGGAGCTGAGCACGACCCTGACAGCATGCACTACTGCGCCCCTAGCGACGACCACGGGGGCAAGTTTGTCATGTACCCCATCGCTGTGAGCGGGGACCACTACAATAACAAGCGTTTCTCCAACTGCAGTAAGATCTCCATAGGGAAGACGCTGCGCCTCAAGGCTCCCATCTGCTTCAAGGAGAGGAACAGCAAGGTGTGTGGGAACTTGCGCGTTGAGGAAGGGGAGGAGTGCGACCCGGGCCTGCTGCACCTCAACGACGACCAGTGCTGCTCCGCCGACTGCAAGTTCAGGCCCGAGTCCCAGTGCAGTGACAGGAACAGTCCATGCTGTAAGAACTGCAAGTTTCAGCAGGCAGGCAAGCCGTGCCAGGAGCCAATCAACGCCACCTGTAAGGGCATGTCCCTCTGCACAGGTAAGAGCAGTGAGTgcccaaacccagacaacgctccGGACAATACCATCTGTGTGGACAGTGGGAGGTGCAGCGACGGGGAGTGCATGACCTTCTGTGAGGCTGTGCAGAACCTACAGCCCTGTGCTTGTAATGAGCTGGTCAATTCGTGTAAGGTCTGCTGCCGGGACAAAAATGGCACCTGCACTCCCTTCGTCAAAAAGGACCAGAACTTCCTGTACCTGCGCAAGGGGAAACCCTGCACCGTGGGCTTCTGTGATGAGGGCgGCAAATGCATGAAGCAAGTCCAGGATGTGATCGAGAGGTTGTGGGATTTCATCGACAAGCTGGACATCAACACTTTCGGGAAGTTCCTGGCAGACAACATCGTGGCCTCCGTGGTGGTGTTCTCTCTGATTTTCTGGATCCCTCTCAGTATCCTGGTGCACTGTGTGGATAAAAATCTGGAGAAGGAGTATGAGAACACCAAGCCCAGCtgccttcggaaaggattcagacgtcttgattttttccacaatttgttacgttacagccttattctaaaatggattaaatcattttaTTCCCTCATCGATTTACACACTAATGTCAAAGCACAaacattttaaacattttttttaataaaaaatggaaatataaaat
>XM_021574703.2
ATTAAGAAGTGAGTACACGCAAATGCTAACAGGAATAGTAAGGGGGTATATGGCCTATATCTGCCAATATCTTCAACTACACCAGTGATGGGATGATTGGTACAACAGTCATTGACGAGAGAACCAGAATATCCAACATAAAACTAATTTTACCTCGGTGCTACACCTGCTCTGCCTAGCCTGGTTAACGGTTCCTGTGTTGACATTATTCAACAACTTGCAATAATGACACAGGTGGAGTAAGCGCTTTTAACGTCATGATGAAGTATCTGGTACTTGTGACCTTTTTGGCTCCTTGTTGGGTCAATTGTGCGATTAAATCAAGGGCCACTGAGGAAGAAACACGGGAAAATGACACAGAGTTCGAGGCTCTGAGCTCATTGCTGTCTGACTTTGAGGTGCTGCCCGTGTCCGGCCTCCAGCAGCACTCACTCAGGAAGAGGGACGTCCACACAGAGTCCCAGCTGGAGCGCATTGTCAGCTTCAGTGCCCTCAAGAGACATTTTAAGCTTTACTTGACAACTAACACAGACTTGTTCACTGAGGACTTCAAAGCTGTGTTTGTAGATAAGCAAGGGAAGGAAGACCGCTATGATGTTCAGCTGCAGAACTACTTTACCGGACATCTTGTAGGCGAGGAGCACTCCCGTGTTCAGGCACACATAGACGGGGACGAGTTCTCGGCCCACAtcctgacagaggagacagagtacAACATAGAGcccctTTGGAGGTTCACCGAGGTGCCCCCCGATGGCCGTCTGTTGGTATATCGCTCTGAGGACATCCGGAACCTCAGTCGCCTGGCCTCGCCCAAAGTGTGTGGATACATCCACGCTGGGGCCCAGGACCTGCTACCAGAGGCCGCCAGAGGTGGAGAGGCACGGGAGgATTCCctccacagagagaagagagtgaccCACAACCACAAGAAGAACACCTGTCCTCTAGCCCTGGTGGCCGACTACCGCTTCTTCAAACACATGGGCCGCGGAGAGGAGAGCATTACACTCAACTACCTGATTGAGTTGATTGACAGAGTGGACGACATGTACAGGAACACAACCTGGGATGACGAGTTTACAGGATACGGTGTTCAGATCCAACAGATCATCATCAACAAGGAGCCGACCAGAGCGCCGCTTGGCCAGGCTGGGCCGGACTGGACCCACTACAACATGAAGGGAAGCCCCATCCAAGGCAAGGAGGTGTGGGACGTCAAGAAACTGCTGGAACAATTTAGCACAGACATAGCGGACAATGCTAGCACCGTGTGCCTTGCCCACCTGTTCACCTATCAGGACTTTGATGAGGGGACACTGGGCTTGGCTTACGTGGCCCCTTCTAAAGCCCAGGCTATGGGGGGCCTCTGCCCTAAACCTTTCTTTCCATCTAGTTCCGTTAAGAACCCCAGTTTCCTCAACACTGGTTTAACCAGCACTAAGAATTATGGCAAAACCATTCTAACCAAGGAAGCAGATTTGGTGACAACCCATGAGCTGGGCCACAACTTTGGAGCTGAGCACGACCCTGACAGCATGCACTACTGCGCCCCTAGCGACGACCACGGGGGCAAGTTTGTCATGTACCCCATCGCTGTGAGCGGGGACCACTACAATAACAAGCGTTTCTCCAACTGCAGTAAGATCTCCATAGGGAAGACGCTGCGCCTCAAGGCTCCCATCTGCTTCAAGGAGAGGAACAGCAAGGTGTGTGGGAACTTGCGCGTTGAGGAAGGGGAGGAGTGCGACCCGGGCCTGCTGCACCTCAACGACGACCAGTGCTGCTCCGCCGACTGCAAGTTCAGGCCCGAGTCCCAGTGCAGTGACAGGAACAGTCCATGCTGTAAGAACTGCAAGTTTCAGCAGGCAGGCAAGCCGTGCCAGGAGCCAATCAACGCCACCTGTAAGGGCATGTCCCTCTGCACAGGTAAGAGCAGTGAGTgcccaaacccagacaacgctccGGACAATACCATCTGTGTGGACAGTGGGAGGTGCAGCGACGGGGAGTGCATGACCTTCTGTGAGGCTGTGCAGAACCTACAGCCCTGTGCTTGTAATGAGCTGGTCAATTCGTGTAAGGTCTGCTGCCGGGACAAAAATGGCACCTGCACTCCCTTCGTCAAAAAGGACCAGAACTTCCTGTACCTGCGCAAGGGGAAACCCTGCACCGTGGGCTTCTGTGATGAGGGCgGCAAATGCATGAAGCAAGTCCAGGATGTGATCGAGAGGTTGTGGGATTTCATCGACAAGCTGGACATCAACACTTTCGGGAAGTTCCTGGCAGACAACATCGTGGCCTCCGTGGTGGTGTTCTCTCTGATTTTCTGGATCCCTCTCAGTATCCTGGTGCACTGTGTGGATAAAAATCTGGAGAAGGAGTATGAGAACACCAAGCCCAGCAAAGCAGAGATGCTGAGCAGCCTCGAGACGGCCTCTGTCGTCTTCATTAAGCCACCTACGCCTCCAACCTCCTCCTCCGGCACTCAGATTCTTCTCCACTCCCTCCCTTCTCTACCCCCAACGGGCCCACCTGCCTCAGGCAGCATCAGTACCCCAGGCTTGGCTTCTGGCCCGGGAAGTGGGGTGGTCATGGTGGGGGAGGGCCCACGGATGGCCACCATACAGGAGGATCCCAGCTGCGATTCTCACCTCGACCCGGATGAAGACGACTTCCCTCCACCCGGAGGCTCCAATGCCACCAAGTCGTCTTACGAGGACCTGACGGCAGAGCGGAGCACGCCGCGGTCGGGCAGCCACGACAAGCCCCGCCTCGAGGCAAACCTGTATGGTGAACAGTAAAGAGTTCTAGTGCTGAGGGAACATgtttgtatatatactcacatacacacagccaCGGGCATGTACATGcaaacacacgtgtgtgtgtgtgtgtacacacacaattTTACACGAGGGAACATAGTCTAGAGTAGATAGATGCGTGCATACAGACACCACACATATAGAAGAAGCATGCATACATGACTAAACTATAGTACAAACACACTGTTATAGTACACACAAACATCCACTCCTAGAAGGGACTGGAATACTGGTTACACAGCACTGGTTGGGGTTCATAGAACAACACCGTTTCTAGTAGAGCTCTTAAATAAAGCACTGTGGGGTTAGCTACATCCTAGATTTTATAAGGTCAATTTGGAAGACTCCCATACAACCAAAACAGGTGTTTGTGAGTAGTAGTGCTCTGATGCAAGTGACTGATGTTTAGAATAGCCTAGATActgaatgatgtgtgtgtgtgtggtggggaagAAATAATTTGTGCCTTGTTAGTTTCAAGAGTCAAAGCCAAGTGCTTTATTTGGCACCACTCACTCTGATACAGGCCAGACAGACCGATACAGGCCAGTCAGACCGATACAGGCCAGACAGTCTTTGGAGTTGTTATTTTGAATGACTTGACTAACAGCTGTCAGAATGGGTTGATTGACAGCTGGGCCAGTTGATTTGATCAGATATTTTGCCCATAATTgagcaaaagatcagaattgggctgcctgtgtaaacgaaGCTAGTAGTTAGGCTGGGCTGGATACTTGGTCAAATCGGCGCGCTTCATCGGACCTTGGCCTACCGAACATCAATgtatctgttctactgtatgtctcCATTGAAGTATTGGTTCTGTTTCATTTGTAGTGAAATAATGATGAACCGTTTTGATATTTGTGTATGGCCTTATTCTGGTACAATGGGCTATTAACCTTTTCATCTTCAACCTGAAGTTTGCAATTCATGCAAGTAATTTATTTGACAATTTACTCAACACATTGGATGATGAGGGACTGTTAGAGCAGTGCAGACATTCTATGCAGTCAGATGTTTGTAGACCAACTTCTGATTTTTTAATCTGAAAAAAAATACTAGTGCCTTATTTCGTAAGttaattatttttgttttatatCTCGCCTCATTTCTCTAGTTatacagtggcttcagaaagtattcacaccccattcaccttttccacattttgttgttacaaagtgggattcaaaagGTTTAATTGCCATTGTCCAAAGAAGAAAATGAATGAAAAATCAAATACTAATATAttgaataagtattcaaccccctgtgtcaatacatgttagaatcaacgTTGGtagcgattaaagctgtgagtctttaacagctttccacacctggattctgcaacatttacccattttttaaaaatgtattattctttttttaaattcttcaagctctgtcaaattggtggtTGTTCATTcctagacaaccatttttaggtcttgccatagattttcggTCACTCGGGAgcattcttggtaagcaactccagtgtagacttgaccttgtgttttaggttattgtcttgctgaaaggtaaattcatttcccagtgtctgtgggaaagcagactaaaccaggtttttctctaggattttgcctgtgcgtcactccattccattttttaaaatcgtgtccttaacgattacaagcatacccataacatgatgcagccatcactatgcttgaaaatatggagcgtGGTACTCCAAACAACTTCTTGTCCTGAATACGAAGTGTTAATTGCTTTATCACATTTATTTGCATtattattttagtgccttgttgcaaacaggatgcatgttttggaatattttttattctgtacaggcttctttgCACTCTGTgtattaggttagtattgtggagtaactacaatgttgttgtcatcttcagttttctcttatcacagccattaaactcttaactgttataaagtcaccattggcctcatggtgaaatccctgagttgtttccttcctctccagcaactaagttaggaaggatacctgtatctttgtagtgactggatgtattgatactccatccaaagtgtaattaataacttcaccatgctcaaaagtatattcaatatctgcttttttatttttacccatctaccaataggtgccctttttttggaaaacctccctgatctttgtggttgaatccgtCAGCGATGACGTAGTCATTGAAAAATCATGTTGCACATGCCACTTATGTGACTtatgcacatttttactcctgaacttatttaggcttgccataacaggtTGAGtacgtattgactcaagacatttcagcttttcatttcattaatttgtaaaatatatattttttaacttgtgtgtaggccagtgatgacattcaattgaatccattttaaattcaggctgtaacataacaaaacctggaaaaagtccaggggtgtgaatactttctgatggcactgtatgTCCTGTAAGCAAAGGGAATATGTTTATCACCCAGCTGGAACTCATGTTTACTAATGTTGCCTGTTAGCTGGCATGGGAAGTGTTGTCCTAAGCACCACTTGGTGTTGGAGTATTCGTGTGCCAATGATAAATGAATACATATCGGCTTGTGGAAGGTTACGCTAAAATATTGTTTTATATAGTCTGTTCACCGTTTCCTGTATATTAGGCAATAAGTACTTCTATATGTTCATTCTGATGAAAGGGGGAATATGTGTCTTGCTTGTGGGTCAAGGGCATTCTGCAGCTTTGCTATAACTTTGGACTAGTATGGTCTGGATACATCTTTAGCATGTACCTAAGTCCATAGTATTAGCTCTGTAGAAGATGTGAGGGGAAAACTTCTTGAATCACGTATTCTTCCTGTCTCCTATGTTTCATTTTCAGGGTGTATTAAATTATCTGGATGAATAAATAAATGCCTCTATGCTAATAAATGTGTACACCAACTTGAAA

Function

NR:

description
disintegrin and metalloproteinase domain-containing protein 17-like

GO: NA

KEGG:

id description
K06059 ADAM17, TACE, CD156b; disintegrin and metalloproteinase domain-containing protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955074.1 False 2573 mRNA 0.51 19 53066817 53092156
XM_021574703.2 True 5793 mRNA 0.46 20 53066819 53097965

Neighbor

gene id symbol gene type direction distance location
LOC110498109 1433b coding upstream 5053 53046245 ~ 53061764 (+)
LOC110498105 LOC106567684 coding upstream 231041 52795320 ~ 52835776 (+)
LOC110498100 LOC106568224 coding upstream 419925 52612596 ~ 52646892 (+)
LOC110498099 LOC106568712 coding upstream 466741 52584118 ~ 52600076 (+)
hnrnpua hnrnpu coding upstream 490705 52561723 ~ 52576154 (+)
LOC110498111 NA coding downstream 8716 53106681 ~ 53113452 (+)
LOC110498114 LOC106566507 coding downstream 161765 53259730 ~ 53342222 (+)
LOC110498117 LOC106566340 coding downstream 244508 53342473 ~ 53444115 (+)
LOC118941378 NA coding downstream 509368 53606967 ~ 53609550 (+)
LOC110498124 LOC106565365 coding downstream 1619808 54717773 ~ 54815955 (+)
G1637184 NA non-coding upstream 139085 52927353 ~ 52927732 (+)
G1637109 LOC106567335 non-coding upstream 224330 52840946 ~ 52842487 (+)
G1637105 NA non-coding upstream 277295 52789317 ~ 52789522 (+)
G1637098 NA non-coding upstream 288045 52778542 ~ 52778772 (+)
G1637075 NA non-coding upstream 308516 52756232 ~ 52758301 (+)
G1637290 NA non-coding downstream 16415 53114380 ~ 53175260 (+)
G1637293 NA non-coding downstream 18762 53116727 ~ 53119961 (+)
G1637627 NA non-coding downstream 154814 53252779 ~ 53253015 (+)
G1637631 NA non-coding downstream 157038 53255003 ~ 53255733 (+)
G1637178 NA other upstream 148339 52917337 ~ 52918478 (+)
G1637065 NA other upstream 311343 52750600 ~ 52755474 (+)
G1634948 NA other upstream 2456338 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 2811565 50243497 ~ 50265945 (+)
G1637730 NA other downstream 332039 53430004 ~ 53430560 (+)
G1638710 NA other downstream 1076831 54174796 ~ 54175130 (+)
G1638780 NA other downstream 1142291 54240256 ~ 54240751 (+)
LOC110498128 LOC106610688 other downstream 1870392 54968308 ~ 54969856 (+)
LOC110498153 LOC106561476 other downstream 2829683 55927603 ~ 55932079 (+)

Expression


Co-expression Network