trnaa-cgc-3


Basic Information

Item Value
gene id trnaa-cgc-3
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 54979518 ~ 54979587 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-cgc-3
gtttggctcagttggtagagcatggggctcGCAACACCAGGgctgtgggttcgattcccactggggacca

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-cgc-3 True 70 mRNA 0.56 1 54979518 54979587
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110498127 LOC105929878 coding downstream 29724 54941168 ~ 54949794 (-)
LOC110498126 LOC106565548 coding downstream 94489 54880391 ~ 54885029 (-)
LOC110498385 LOC106565104 coding downstream 129025 54816197 ~ 54850493 (-)
LOC110498122 LOC106565612 coding downstream 268901 54704089 ~ 54710617 (-)
LOC110498121 LOC106565456 coding downstream 284179 54667402 ~ 54695339 (-)
LOC100499589 LOC100499589 coding upstream 24327 55003914 ~ 55006739 (-)
LOC110498131 LOC106564706 coding upstream 30980 55010567 ~ 55013721 (-)
LOC110498132 LOC106564610 coding upstream 89731 55069318 ~ 55096241 (-)
LOC110498583 NA coding upstream 124732 55104319 ~ 55106565 (-)
LOC110498135 LOC106564204 coding upstream 215900 55195487 ~ 55213703 (-)
G1639779 NA non-coding downstream 103273 54875973 ~ 54876245 (-)
G1639757 NA non-coding downstream 127291 54843847 ~ 54852227 (-)
G1639740 NA non-coding downstream 146396 54831660 ~ 54833122 (-)
G1639755 NA non-coding downstream 148979 54829676 ~ 54830539 (-)
G1639892 NA non-coding upstream 65022 55044609 ~ 55044902 (-)
G1639907 NA non-coding upstream 83939 55063526 ~ 55063960 (-)
G1639908 NA non-coding upstream 84732 55064319 ~ 55064840 (-)
G1639909 NA non-coding upstream 86934 55066521 ~ 55067689 (-)
G1639910 NA non-coding upstream 88270 55067857 ~ 55069025 (-)
G1639267 NA other downstream 397167 54582006 ~ 54582351 (-)
G1638677 NA other downstream 825413 54145197 ~ 54154105 (-)
G1636861 NA other downstream 2623369 52350969 ~ 52356149 (-)
G1636669 NA other downstream 3081010 51896788 ~ 51898508 (-)
G1635971 NA other downstream 3453098 51525986 ~ 51526420 (-)
G1641074 NA other upstream 966986 55946573 ~ 55946964 (-)
G1641501 NA other upstream 1600901 56497389 ~ 56584678 (-)
LOC110498158 ctl2b other upstream 1811264 56790811 ~ 56794401 (-)
G1641881 NA other upstream 2004677 56984264 ~ 56984709 (-)
LOC110498390 LOC106612640 other upstream 2325139 57304724 ~ 57400864 (-)

Expression

trnaa-cgc-3 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: -0.5 to 0.5.
End of interactive chart.

Co-expression Network