Gene
RNA
| Item | Value |
|---|---|
| gene id | atp5if1b |
| gene name | LOC106563115 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 55465908 ~ 55467811 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ATPase inhibitor B, mitochondrial-like |
| id | name | namespace |
|---|---|---|
| GO:0043086 | negative regulation of catalytic activity | biological_process |
| GO:0045980 | negative regulation of nucleotide metabolic process | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0004857 | enzyme inhibitor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021574754.2 | True | 572 | mRNA | 0.46 | 3 | 55465908 | 55467811 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zmpste24 | LOC106563167 | coding | upstream | 6348 | 55454754 ~ 55459560 (+) |
| rlf | LOC106563209 | coding | upstream | 21000 | 55428446 ~ 55444908 (+) |
| si:ch211-15d5.11 | LOC106563256 | coding | upstream | 62542 | 55375535 ~ 55403366 (+) |
| LOC118941490 | NA | coding | upstream | 237032 | 55226853 ~ 55228876 (+) |
| LOC110498133 | LOC106563926 | coding | upstream | 326880 | 55137415 ~ 55176085 (+) |
| rpl13a | rpl13a | coding | downstream | 1096 | 55468907 ~ 55472622 (+) |
| LOC118941555 | NA | coding | downstream | 3077 | 55470888 ~ 55470969 (+) |
| LOC118941561 | NA | coding | downstream | 3540 | 55471351 ~ 55471422 (+) |
| LOC118941554 | NA | coding | downstream | 4350 | 55472161 ~ 55472242 (+) |
| LOC110498147 | LOC106562977 | coding | downstream | 5272 | 55473083 ~ 55482568 (+) |
| G1640218 | NA | non-coding | upstream | 1883 | 55460438 ~ 55464025 (+) |
| G1640247 | NA | non-coding | upstream | 43189 | 55422393 ~ 55422719 (+) |
| G1640242 | NA | non-coding | upstream | 50164 | 55414476 ~ 55415744 (+) |
| G1640241 | NA | non-coding | upstream | 51900 | 55413780 ~ 55414008 (+) |
| G1640210 | NA | non-coding | upstream | 111004 | 55354567 ~ 55354904 (+) |
| G1640257 | NA | non-coding | downstream | 120 | 55467931 ~ 55468192 (+) |
| G1640255 | NA | non-coding | downstream | 28345 | 55496156 ~ 55498648 (+) |
| G1640411 | NA | non-coding | downstream | 49835 | 55517646 ~ 55518062 (+) |
| G1640691 | NA | non-coding | downstream | 253025 | 55720836 ~ 55721162 (+) |
| G1640697 | NA | non-coding | downstream | 260714 | 55728525 ~ 55728767 (+) |
| LOC110498128 | LOC106610688 | other | upstream | 496298 | 54968308 ~ 54969856 (+) |
| G1638780 | NA | other | upstream | 1225157 | 54240256 ~ 54240751 (+) |
| G1638710 | NA | other | upstream | 1290778 | 54174796 ~ 54175130 (+) |
| G1637730 | NA | other | upstream | 2035348 | 53430004 ~ 53430560 (+) |
| G1637178 | NA | other | upstream | 2547430 | 52917337 ~ 52918478 (+) |
| LOC110498153 | LOC106561476 | other | downstream | 459837 | 55927603 ~ 55932079 (+) |
| G1641405 | NA | other | downstream | 1032346 | 56500157 ~ 56505897 (+) |
| G1641407 | NA | other | downstream | 1042118 | 56509929 ~ 56511097 (+) |
| G1641713 | LOC106560842 | other | downstream | 1358141 | 56825952 ~ 56830309 (+) |
| G1641935 | NA | other | downstream | 1668015 | 57135826 ~ 57143925 (+) |
