Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941554 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 55472161 ~ 55472242 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037851.1 | True | 82 | mRNA | 0.37 | 1 | 55472161 | 55472242 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941561 | NA | coding | upstream | 739 | 55471351 ~ 55471422 (+) |
| LOC118941555 | NA | coding | upstream | 1192 | 55470888 ~ 55470969 (+) |
| atp5if1b | LOC106563115 | coding | upstream | 4350 | 55465908 ~ 55467811 (+) |
| zmpste24 | LOC106563167 | coding | upstream | 12601 | 55454754 ~ 55459560 (+) |
| rlf | LOC106563209 | coding | upstream | 27253 | 55428446 ~ 55444908 (+) |
| LOC110498147 | LOC106562977 | coding | downstream | 841 | 55473083 ~ 55482568 (+) |
| htr1d | LOC106562880 | coding | downstream | 206826 | 55679068 ~ 55706728 (+) |
| kdm1a | LOC106562352 | coding | downstream | 287585 | 55759827 ~ 55785721 (+) |
| LOC110498388 | LOC106561476 | coding | downstream | 379874 | 55852116 ~ 55882702 (+) |
| LOC110498153 | LOC106561476 | coding | downstream | 455361 | 55927603 ~ 55932079 (+) |
| G1640257 | NA | non-coding | upstream | 3969 | 55467931 ~ 55468192 (+) |
| G1640218 | NA | non-coding | upstream | 8136 | 55460438 ~ 55464025 (+) |
| G1640247 | NA | non-coding | upstream | 49442 | 55422393 ~ 55422719 (+) |
| G1640242 | NA | non-coding | upstream | 56417 | 55414476 ~ 55415744 (+) |
| G1640241 | NA | non-coding | upstream | 58153 | 55413780 ~ 55414008 (+) |
| G1640255 | NA | non-coding | downstream | 23914 | 55496156 ~ 55498648 (+) |
| G1640411 | NA | non-coding | downstream | 45404 | 55517646 ~ 55518062 (+) |
| G1640691 | NA | non-coding | downstream | 248594 | 55720836 ~ 55721162 (+) |
| G1640697 | NA | non-coding | downstream | 256283 | 55728525 ~ 55728767 (+) |
| G1640730 | NA | non-coding | downstream | 316679 | 55788921 ~ 55794386 (+) |
| LOC110498128 | LOC106610688 | other | upstream | 502551 | 54968308 ~ 54969856 (+) |
| G1638780 | NA | other | upstream | 1231410 | 54240256 ~ 54240751 (+) |
| G1638710 | NA | other | upstream | 1297031 | 54174796 ~ 54175130 (+) |
| G1637730 | NA | other | upstream | 2041601 | 53430004 ~ 53430560 (+) |
| G1637178 | NA | other | upstream | 2553683 | 52917337 ~ 52918478 (+) |
| G1641405 | NA | other | downstream | 1027915 | 56500157 ~ 56505897 (+) |
| G1641407 | NA | other | downstream | 1037687 | 56509929 ~ 56511097 (+) |
| G1641713 | LOC106560842 | other | downstream | 1353710 | 56825952 ~ 56830309 (+) |
| G1641935 | NA | other | downstream | 1663584 | 57135826 ~ 57143925 (+) |
