Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110498161 |
| gene name | LOC106560842 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 56824036 ~ 56837037 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036955128.1 | False | 2294 | mRNA | 0.55 | 4 | 56824036 | 56837033 |
| XM_036955129.1 | False | 2271 | mRNA | 0.55 | 4 | 56824036 | 56837037 |
| TU1878062 | True | 537 | lncRNA | 0.45 | 1 | 56824104 | 56824640 |
56,810,000
56,812,000
56,814,000
56,816,000
56,818,000
56,820,000
56,822,000
56,824,000
56,824,000
56,826,000
56,828,000
56,830,000
56,832,000
56,834,000
56,836,000
56,838,000
NC_048583.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498160 | LOC106560797 | coding | downstream | 11929 | 56805556 ~ 56812107 (-) |
| LOC110498158 | ctl2b | coding | downstream | 29635 | 56790811 ~ 56794401 (-) |
| trnaa-cgc-4 | NA | coding | downstream | 297383 | 56526583 ~ 56526653 (-) |
| LOC118941491 | LOC106562077 | coding | downstream | 937845 | 55882882 ~ 55936463 (-) |
| LOC110498152 | LOC106562166 | coding | downstream | 962516 | 55788913 ~ 55861520 (-) |
| LOC118941497 | LOC106609620 | coding | upstream | 324025 | 57069887 ~ 57165047 (-) |
| LOC110498169 | trnp1 | coding | upstream | 446643 | 57283679 ~ 57297672 (-) |
| LOC110498390 | LOC106612640 | coding | upstream | 467687 | 57304724 ~ 57400864 (-) |
| LOC110498393 | LOC106613035 | coding | upstream | 659437 | 57496474 ~ 57513783 (-) |
| dcdc2b | LOC106613317 | coding | upstream | 851521 | 57688558 ~ 57706181 (-) |
| G1641784 | NA | non-coding | downstream | 18968 | 56804682 ~ 56805068 (-) |
| G1641778 | NA | non-coding | downstream | 20153 | 56801496 ~ 56803883 (-) |
| G1641783 | NA | non-coding | downstream | 22831 | 56799625 ~ 56801205 (-) |
| G1641782 | NA | non-coding | downstream | 26709 | 56797040 ~ 56797327 (-) |
| G1641634 | NA | non-coding | downstream | 90468 | 56733236 ~ 56733568 (-) |
| G1641804 | NA | non-coding | upstream | 1144 | 56838181 ~ 56838430 (-) |
| G1641811 | NA | non-coding | upstream | 9676 | 56846713 ~ 56846912 (-) |
| G1641824 | NA | non-coding | upstream | 33668 | 56870705 ~ 56871727 (-) |
| G1641840 | NA | non-coding | upstream | 78482 | 56915519 ~ 56915739 (-) |
| G1641863 | NA | non-coding | upstream | 130973 | 56968010 ~ 56968327 (-) |
| G1641501 | NA | other | downstream | 239358 | 56497389 ~ 56584678 (-) |
| G1641074 | NA | other | downstream | 877072 | 55946573 ~ 55946964 (-) |
| G1639267 | NA | other | downstream | 2241685 | 54582006 ~ 54582351 (-) |
| G1638677 | NA | other | downstream | 2669931 | 54145197 ~ 54154105 (-) |
| G1641881 | NA | other | upstream | 147227 | 56984264 ~ 56984709 (-) |
| LOC110498179 | LOC106611855 | other | upstream | 1059747 | 57893957 ~ 57955833 (-) |
| G1643293 | dync1h1 | other | upstream | 1398908 | 58235945 ~ 58243786 (-) |
| G1643998 | NA | other | upstream | 2070824 | 58907861 ~ 58909339 (-) |
| G1641794 | NA | non-coding | upstream | 737 | 56825377 ~ 56825609 (-) |
| G1641797 | NA | non-coding | upstream | 4262 | 56828902 ~ 56829722 (-) |
