slc25a47b (LOC106560560)


Basic Information

Item Value
gene id slc25a47b
gene name LOC106560560
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 57826676 ~ 57830485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955166.1
TTGTTGCACAACGAGTCATAATTCAATGTGACACAATGCCGGTGTAGCATTTTGATGTTTGACAGTAGCTAGCTACCATAGCTGTGTAGGTCGTCTATGGTCACGTTAGATCTCTATGTAGAAAGCTTTAGTAAACATTTTCTGATGCGATGTATACCTAATTCACCTGACAGTGAATCGTTGAGGAGAATAATATTAAATGATATTTAGATCAAAATTGAAGGTCGTGACTCGTGTTATCTAGAAAAACATCATAGCTTGGCTAACTAGCTTAGCAGGCAGCCATCTAAATGAATTGAGTTGACCCCCCCAAGGAGGAAAATATGCATTTGGCAGATTTCGTTGCTGGTTCCGTTGGAGGAGCCTTTGGAGTGGCTGTGGGGTATCCTTTGGACACAGTGAAGGTGAGAATACAGACACAAAGGAGATTCACAGGAGTTTGGCAATGTATTCATACTACATGGAAGAAAGAAGGGGTGAATGGATTCTACAGGGGCATGTCCATGCCAGTCACCACTGTGTCCATCAGCTCCTCTGTAGTGTTTGGCGTCTACAGGAATGTCCTGCAGTGTTTACATCAACTACGATCCACCTCCACAGGTTTGGATTTTCTGCCAGCCAAAGTGGACTTCTTCTTGTCCGGGTTGTCAGGAGGTGTTGCCCAGGTATCTGTAATGGCACCAGCTGACATAGTAAAAGTACGGATGCAGTGTCAGACGGTACACCAAGGCTTGGACGCTCAGCAACCCAAGTATCGCGGCCCAATGCACTGTCTGCTGACCATCGCTCGTGAAGAGGGCTTCCTCGGGCTGTACAAGGGAGCTGGTGCCCTCGCCCTGCGAGACGGCCCCTCTTTTGCCACCTACTTCACTATTTACCACGTTATCTGTGAGCAGCTATCTCCACCTGAGAACACCCAGCCAGGTAAACACGTAGTACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGTACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCGGAGAACACCCAGCCAGGTAAACACACACCACCTGGGAACACCCAGCCAGGTAAACACACCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACATGGTACCCGAGAACACCCAGCCAGGTAAACACATGGTACCCGAGAACACCCAGCCAGGTAAACACATAGTACCTGAGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCCGGGTACACCCAGCCAGGTAAACACACAGCACCTGGGTACACCCAGCCAGGTAAACACACAGCACATGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGTACACCCAGCCAGGTAAACACACAGCACATGGGAACACCCAGCCAGGTAAACACACAGCTTCACTCTGTAAGAATCTTCCAAAGCGTATGCTTCTGTATCTCGTATGCTTCTGTCCTCTTAAGTGTACATGGCTGCTTTTGCAATTGGTCATCATGATCCAGGATAATTTAGTGTTGATTATTTGgtgtctcttcccccccc
>XR_005037805.1
TTGTTGCACAACGAGTCATAATTCAATGTGACACAATGCCGGTGTAGCATTTTGATGTTTGACAGTAGCTAGCTACCATAGCTGTGTAGGTCGTCTATGGTCACGTTAGATCTCTATGTAGAAAGCTTTAGTAAACATTTTCTGATGCGATGTATACCTAATTCACCTGACAGTGAATCGTTGAGGAGAATAATATTAAATGATATTTAGATCAAAATTGAAGGTCGTGACTCGTGTTATCTAGAAAAACATCATAGCTTGGCTAACTAGCTTAGCAGGCAGCCATCTAAATGAATTGAGTTGACCCCCCCAAGGAGGAAAATATGCATTTGGCAGATTTCGTTGCTGGTTCCGTTGGAGGAGCCTTTGGAGTGGCTGTGGGGTATCCTTTGGACACAGTGAAGGTGAGAATACAGACACAAAGGAGATTCACAGGAGTTTGGCAATGTATTCATACTACATGGAAGAAAGAAGGGGTGAATGGATTCTACAGGGGCATGTCCATGCCAGTCACCACTGTGTCCATCAGCTCCTCTGTAGTGTTTGGCGTCTACAGGAATGTCCTGCAGTGTTTACATCAACTACGATCCACCTCCACAGGTTTGGATTTTCTGCCAGCCAAAGTGGACTTCTTCTTGTCCGGGTTGTCAGGAGGTGTTGCCCAGGTATCTGTAATGGCACCAGCTGACATAGTAAAAGTACGGATGCAGTGTCAGACGGTACACCAAGGCTTGGACGCTCAGCAACCCAAGTATCGCGGCCCAATGCACTGTCTGCTGACCATCGCTCGTGAAGAGGGCTTCCTCGGGCTGTACAAGGGAGCTGGTGCCCTCGCCCTGCGAGACGGCCCCTCTTTTGCCACCTACTTCACTATTTACCACGTTATCTGTGAGCAGCTATCTCCACCTGAGAACACCCAGCCAGGTAAACACGTAGTACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGTACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCGGAGAACACCCAGCCAGGTAAACACACACCACCTGGGAACACCCAGCCAGGTAAACACACCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACATGGTACCCGAGAACACCCAGCCAGGTAAACACATGGTACCCGAGAACACCCAGCCAGGTAAACACATAGTACCTGAGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCCGGGTACACCCAGCCAGGTAAACACACAGCACCTGGGTACACCCAGCCAGGTAAACACACAGCACATGGGAACACCCAGCCAGGTAAACACACAGCTTCACTCTGTAAGAATCTTCCAAAGCGTATGCTTCTGTATCTCGTATGCTTCTGTCCTCTTAAGTGTACATGGCTGCTTTTGCAATTGGTCATCATGATCCAGGATAATTTAGTGTTGATTATTTGgtgtctcttcccccccc
>XR_005037806.1
TTGTTGCACAACGAGTCATAATTCAATGTGACACAATGCCGGTGTAGCATTTTGATGTTTGACAGTAGCTAGCTACCATAGCTGTGTAGGTCGTCTATGGTCACGTTAGATCTCTATGTAGAAAGCTTTAGTAAACATTTTCTGATGCGATGTATACCTAATTCACCTGACAGTGAATCGTTGAGGAGAATAATATTAAATGATATTTAGATCAAAATTGAAGGTCGTGACTCGTGTTATCTAGAAAAACATCATAGCTTGGCTAACTAGCTTAGCAGGCAGCCATCTAAATGAATTGAGTTGACCCCCCCAAGGAGGAAAATATGCATTTGGCAGATTTCGTTGCTGGTTCCGTTGGAGGAGCCTTTGGAGTGGCTGTGGGGTATCCTTTGGACACAGTGAAGGTGAGAATACAGACACAAAGGAGATTCACAGGAGTTTGGCAATGTATTCATACTACATGGAAGAAAGAAGGGGTGAATGGATTCTACAGGGGCATGTCCATGCCAGTCACCACTGTGTCCATCAGCTCCTCTGTAGTGTTTGGCGTCTACAGGAATGTCCTGCAGTGTTTACATCAACTACGATCCACCTCCACAGGTTTGGATTTTCTGCCAGCCAAAGTGGACTTCTTCTTGTCCGGGTTGTCAGGAGGTGTTGCCCAGGTATCTGTAATGGCACCAGCTGACATAGTAAAAGTACGGATGCAGTGTCAGACGGTACACCAAGGCTTGGACGCTCAGCAACCCAAGTATCGCGGCCCAATGCACTGTCTGCTGACCATCGCTCGTGAAGAGGGCTTCCTCGGGCTGTACAAGGGAGCTGGTGCCCTCGCCCTGCGAGACGGCCCCTCTTTTGCCACCTACTTCACTATTTACCACGTTATCTGTGAGCAGCTATCTCCACCTGAGAACACCCAGCCAGGTAAACACGTAGTACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGTACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCGGAGAACACCCAGCCAGGTAAACACACACCACCTGGGAACACCCAGCCAGGTAAACACACCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACACAGCACCTGGGAACACCCAGCCAGGTAAACACATGGTACCCGAGAACACCCAGCCAGGTAAACACATGGTACCCGAGAACACCCAGCCAGGTAAACACATAGTACCTGAGAACACCCAGCCAGagtggaATGTGGTTCTGCTTGCTGGTGGACTGTCAGGGATGTGTGGCTGGTGCATAGGGACACCCATGGACGTGATCAAATCCCGTCTGCAGGTGGACGGTATGGGCAAGAGGAGATACACAGGTTTCTTCCACTGCATC
>XM_036955167.1
CACAACGAGTCATAATTCAATGTGACACAATGCCGGTGTAGCATTTTGATGTTTGACAGTAGCTAGCTACCATAGCTGTGTAGGTCGTCTATGGTCACGTTAGATCTCTATGTAGAAAGCTTTAGTAAACATTTTCTGATGCGATGTATACCTAATTCACCTGACAGTGAATCGTTGAGGAGAATAATATTAAATGATATTTAGATCAAAATTGAAGGTCGTGACTCGTGTTATCTAGAAAAACATCATAGCTTGGCTAACTAGCTTAGCAGGCAGCCATCTAAATGAATTGAGTTGACCCCCCCAAGGAGGAAAATATGCATTTGGCAGATTTCGTTGCTGGTTCCGTTGGAGGAGCCTTTGGAGTGGCTGTGGGGTATCCTTTGGACACAGTGAAGGTGAGAATACAGACACAAAGGAGATTCACAGGAGTTTGGCAATGTATTCATACTACATGGAAGAAAGAAGGGGTGAATGGATTCTACAGGGGCATGTCCATGCCAGTCACCACTGTGTCCATCAGCTCCTCTGTAGTGTTTGGCGTCTACAGGAATGTCCTGCAGTGTTTACATCAACTACGATCCACCTCCACAGGTTTGGATTTTCTGCCAGCCAAAGTGGACTTCTTCTTGTCCGGGTTGTCAGGAGGTGTTGCCCAGGTATCTGTAATGGCACCAGCTGACATAGTAAAAGTACGGATGCAGTGTCAGACGGTACACCAAGGCTTGGACGCTCAGCAACCCAAGTATCGCGGCCCAATGCACTGTCTGCTGACCATCGCTCGTGAAGAGGGCTTCCTCGGGCTGTACAAGGGAGCTGGTGCCCTCGCCCTGCGAGACGGCCCCTCTTTTGCCACCTACTTCACTATTTACCACGTTATCTGTGAGCAGCTATCTCCACCTGAGAACACCCAGCCAGagtggaATGTGGTTCTGCTTGCTGGTGGACTGTCAGGGATGTGTGGCTGGTGCATAGGGACACCCATGGACGTGATCAAATCCCGTCTGCAGGTGGACGGTATGGGCAAGAGGAGATACACAGGTTTCTTCCACTGCATCGCACAGAGCATACGCACTGAGGGGCCGGGTGTTCTCTTCAAAGGCCTGAGCCTCAATTGCATACGGGCCTTCCCTGTCAACATGTCCGTGTTCGCCATGTACGAGGTGGTTGTGCGCCTCCTCCGACCGAAAACTTGAATTTAAAGGCTTGGGTTGTTCATTAGGTGCCGAATGGACTGAAATAGGGAGGAACTACTGGTCCGAGAACAAATTTGGACACGGGCTGCACTAATGAATCCAACCTTGGCTTTGAAGACTTGGGTGATGGGATTCTATTTTAATTGTTTCTCATGCCATTTTCCATGACTAGAATAACACCCAATCCGTTGTTTATGTTGTATCATTATTCACCATTGCCTCAGTTGCTATGTGATTTTTATGTAGTGCCATACTGCACTACATTTCCCCAGTAAGATTTATttgaaatatttctgtatttcaagggaAAATATGAATTGAAAATGAATACTAAGCTAAAAGTTTTATGGTAGAGTTCTGATTGTTTAGAAATAGGACCTAATAGTACTACAGAAACGTCATCATTTTGACTTACCTACTTTTTACACAGCATTCCCTCACTGCCCTTAGAACATAACAGGGGTGTATTTTACACCGCACGATCACTTGATTTCAATGGCTACAACTGAAGCTGATGGACAACGTGTCTTAGAAAATATGAAGTTTTTCCTGAATACTGTATTAATGAAAGTTACTTGTTGATCCTGCCCAAATAATTATCCCACTGTTCATATCGCTCCTATCGGCAGCTCGGAAACAAGCGTCTTTGAAGTAGGGCCACCACCCAGCAAACTGCAGTATACTGGTGGTCGGTCTTTAGGAATTGATTAACTTCTGCCACAGGCTTTCACCTCACCTTCAGTATGAAAGTGAGCTGTGGCTAGGAATTTATCAACTTTGCTTTGTTACTGTAGCCAAGCAGTATCAATTATTTGTCCTTGACTTGGACAGTATTTTCAATGGTACTGGTAAACTCCCAGTTCTCAAAATACTGCAAGTCATTCTCTGTATACCACATGTACTGATGATCCTGTACTTGTGATTTGGTGTTTGAGAAAAAACAAAACTTCCAAGTATCGCATCTGATTTTGCTGTGAGTGAAACGTATAAGGGAGTTTTAACACGCACAAACATTTCAGCAGTGTAAagtgaaaaaataaaatatatttaatgaaTGAATAAAGATTCACAAGACAGA

Function

NR:

description
solute carrier family 25 member 47-B-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15123 SLC25A45_47; solute carrier family 25, member 45/47

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955166.1 False 1804 mRNA 0.51 5 57826676 57829121
XR_005037805.1 False 1738 mRNA 0.50 6 57826676 57829121
XR_005037806.1 False 1590 mRNA 0.51 6 57826676 57829269
XM_036955167.1 True 2274 mRNA 0.44 6 57826682 57830485

Neighbor

gene id symbol gene type direction distance location
LOC110498171 rcan3 coding upstream 178405 57564277 ~ 57648271 (+)
nipal3 nipal3 coding upstream 262838 57554950 ~ 57563838 (+)
LOC110498392 LOC106612959 coding upstream 323923 57400757 ~ 57502753 (+)
LOC110498167 LOC106612547 coding upstream 552074 57215239 ~ 57274602 (+)
LOC110498389 LOC106612499 coding upstream 629721 57176839 ~ 57196955 (+)
LOC110498394 NA coding downstream 27385 57857870 ~ 57888014 (+)
LOC110498180 dlk1 coding downstream 203646 58034131 ~ 58040622 (+)
dio3a dio3 coding downstream 280025 58110510 ~ 58111944 (+)
dync1h1 dync1h1 coding downstream 362494 58192979 ~ 58248705 (+)
LOC118941557 NA coding downstream 405310 58235795 ~ 58235866 (+)
G1642720 NA non-coding upstream 12064 57810114 ~ 57814612 (+)
G1642600 NA non-coding upstream 106499 57716954 ~ 57720177 (+)
G1642593 NA non-coding upstream 123640 57702600 ~ 57703036 (+)
G1642589 NA non-coding upstream 131890 57694434 ~ 57694786 (+)
G1642579 NA non-coding upstream 153190 57670606 ~ 57673486 (+)
G1642743 NA non-coding downstream 22372 57852857 ~ 57853179 (+)
G1642749 NA non-coding downstream 33033 57863518 ~ 57864087 (+)
G1642766 NA non-coding downstream 56639 57887124 ~ 57887338 (+)
G1642824 NA non-coding downstream 63400 57893885 ~ 57895278 (+)
G1642923 NA non-coding downstream 224419 58054904 ~ 58076331 (+)
G1642565 NA other upstream 144123 57656349 ~ 57682553 (+)
G1642062 NA other upstream 549899 57275053 ~ 57276777 (+)
G1641935 NA other upstream 682751 57135826 ~ 57143925 (+)
G1641713 LOC106560842 other upstream 996367 56825952 ~ 56830309 (+)
G1641407 NA other upstream 1315579 56509929 ~ 56511097 (+)
G1642993 LOC106611338 other downstream 333992 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 462851 58293310 ~ 58298259 (+)
G1644123 NA other downstream 1224038 59054523 ~ 59057223 (+)
G1644280 NA other downstream 1366199 59196684 ~ 59197013 (+)
G1644569 NA other downstream 1778115 59608600 ~ 59609394 (+)

Expression


Co-expression Network