LOC110498394


Basic Information

Item Value
gene id LOC110498394
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 57857870 ~ 57888014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110498394
atgaatacaccccatgtGCTACAGATTTGGGAATGTGCAGAGAGTGGGTGGTGCCTAATGGTATACTCCTCCCACTCACGGGCGGTGCGAGATGCCTGTTGGTTCCCCTGTGGGCGACGCCTCCTCACTGGCTTCTTTGACAACCCAGCCATGCCCAACGACCCCGAAGTGTTCCTGTCTGGGGGTTACAGTGCAGAAGTCAAGGCTTGGGACGCCCATACCTGCAAGAGGGTGTACAGAGCAGGAATCCTGCAAACTTTGGCCATCCTATTCCTGACCGGGAGCAGGGAGTTTGTGACCAGCAGCGACTCAGTCAGCCAGGACTCTGCGGAGCGCACGCTCATCGCATGGGACTTCCAAACTATTGCTAAGGTCTCCAAACAGATCTACCATGAGCTGTACATGTGCCCCAGCCTTTACCTCAAGGAAGACTCCTTTGTAGCGCACACCAATGACAACTACATGGCCCTATTGTCTGCACAGCGGCCATACAGAATGACAAGAGGAGGCGGTATGAGGGACACAAGgCGGAGGCCTATCACACGGATGCTGAATATGCTGCACTCACACCAGCAGGCCTGCGAGTGTCTCTGCACCCTGTGCTGCCCGCTGTGGTGACTACGTGTGACTGGGGTGACGAGATCAGGATCTCGCAGCGATTGACACAGAAGAGGTGGATGTTCAATCGTCGCTGGGAGTTTCAGGCCCTGATGTGA

Function

NR:

description
WD repeat-containing protein 25-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110498394 True 716 mRNA 0.56 6 57857870 57888014

Neighbor

gene id symbol gene type direction distance location
slc25a47b LOC106560560 coding upstream 27385 57826676 ~ 57830485 (+)
LOC110498171 rcan3 coding upstream 209599 57564277 ~ 57648271 (+)
nipal3 nipal3 coding upstream 294032 57554950 ~ 57563838 (+)
LOC110498392 LOC106612959 coding upstream 355117 57400757 ~ 57502753 (+)
LOC110498167 LOC106612547 coding upstream 583268 57215239 ~ 57274602 (+)
LOC110498180 dlk1 coding downstream 146117 58034131 ~ 58040622 (+)
dio3a dio3 coding downstream 222496 58110510 ~ 58111944 (+)
dync1h1 dync1h1 coding downstream 304965 58192979 ~ 58248705 (+)
LOC118941557 NA coding downstream 347781 58235795 ~ 58235866 (+)
LOC118941558 NA coding downstream 348235 58236249 ~ 58236320 (+)
G1642743 NA non-coding upstream 4691 57852857 ~ 57853179 (+)
G1642720 NA non-coding upstream 43258 57810114 ~ 57814612 (+)
G1642600 NA non-coding upstream 137693 57716954 ~ 57720177 (+)
G1642593 NA non-coding upstream 154834 57702600 ~ 57703036 (+)
G1642589 NA non-coding upstream 163084 57694434 ~ 57694786 (+)
G1642824 NA non-coding downstream 5871 57893885 ~ 57895278 (+)
G1642923 NA non-coding downstream 166890 58054904 ~ 58076331 (+)
G1642946 NA non-coding downstream 193712 58081726 ~ 58082116 (+)
G1642991 NA non-coding downstream 253791 58141805 ~ 58142036 (+)
G1642937 NA non-coding downstream 374358 58262372 ~ 58262955 (+)
G1642565 NA other upstream 175317 57656349 ~ 57682553 (+)
G1642062 NA other upstream 581093 57275053 ~ 57276777 (+)
G1641935 NA other upstream 713945 57135826 ~ 57143925 (+)
G1641713 LOC106560842 other upstream 1027561 56825952 ~ 56830309 (+)
G1641407 NA other upstream 1346773 56509929 ~ 56511097 (+)
G1642993 LOC106611338 other downstream 276463 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 405322 58293310 ~ 58298259 (+)
G1644123 NA other downstream 1166509 59054523 ~ 59057223 (+)
G1644280 NA other downstream 1308670 59196684 ~ 59197013 (+)
G1644569 NA other downstream 1720586 59608600 ~ 59609394 (+)

Expression


Co-expression Network