LOC110498180 (dlk1)


Basic Information

Item Value
gene id LOC110498180
gene name dlk1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 58034131 ~ 58040622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021574796.2
GACTGGACAGCTCCTTTCCTAAATCAGACGGGAGGAGCCAAGCGTGGACCACAATGCTGTCTGTCTACTCTATCACACAAAAACCTCACGTCTGAATAGCTACACGGCCGTCTTTATTCCAGTAAATATAGTGCCATGCTTGGACGCATCCAATATGACTGACTAGCTAGCTGAACAACTAAGCGATATAGGAGAAGAAGCATGCTGAAAATCAGGATGTGCCTGACAACATTTGGGTTATTTCTGGTCTTGAGTGTTGCCATCActaaagCTATTGAATGCAGCGCAGGGTGCAATCCTGAAAACGGCTACTGTGAAAAGCCTGAGGAATGCAGATGCAAACCAGGCTGGCAGGGTGTAACATGCAAGCAGTGCATGCCCTTCCCTGGCTGTCTTCATGGCAGCTGTGAGAAAGCATGGCAGTGCATCTGTGAAGAGGGCTGGATGGGGAGCCAGTGTGACCAAGACACCAACCAGTGCTCATCTAAACCATGCACTGATAACTCCACATGCATCCAGACTGGCCAGGGAGGATACCTCTGCATTTGTCTGCCTGGTTACACAGGAGAGAGCTGCCACCTGAAAAAGGGATCATGTCTAACAAACGGCTCTCCCTGCCAAAATGGTGGCACCTGCTCCGATGCCGGTGGCTTGGCAGCCTACCCTTCCTGCGCTTGTCCCCTTGGATTCGCTGGAGACTTCTGTGAGATTGACACGGACAGCTGTGATCCCAACCCCTGCCTCAACGGGGGCAACTGCACCGACTACGGTCCTGCGTTCACCTGCGCCTGCCCCGCGGGCTTCAACGGCCCCACCTGTAACAACACCCATGTGGACCCCCTCTCCCCCTGTGCTAGTTCCCCCTGTGGGAACGGGGGCACCTGCGTGGTGGGGAGCCAAAAGAACAGGGCTGGGATGTACCATTGTCTGTGCCTCCCAGGGTGCACTTTCACTGGGCATGAATGTACACCGACCCAGCAGCCACACAGGCCCAAAGCCAAACTCAGGCTGGCCAAACTCTCCCCATCACACTACAGCCTACCTGCCCACGCCTTCCATAAACTACTAAGGCCCCCCGAGAGGGACCTTCTCAAGATCAGCCTGAAGGAGACGGTTCACTCGGCCTCTGCCGCCAGCCTGGTCACCCGCAGTCAGCTCATCTGTTTCGGGATGCTGGGCCTGCTCACCTGCCTGGTGATCCTGGGAACCACAGGTATTATCTTCTTCAACCGCTGCGAGACGTGGATGGCCAACGCCAAGTACAGCCATCTGGTGCGCCAGCAGAGAGAGCATCTGTTGAGAGCCAATAACAGCGAGGATGAGGGGGACCGCTCTGTCAACATCATCCTCCCTGAGAAGATCAAGCTCACCAGCTTTGGCAAACATTACACGTCAATCTGACATGTGGGTATTTTGACTGACCGTCTGCATAAggagtgtgtttgagtgtgcaAGGACAcctacaaaacaaatggagaagGTCATGGATTGAAAATAGATGTTAAAGAGAAACATGAGGCTCCCTCTCTGAAAAATGCAGTTATTCTGTTCTAATGTGATCCACTGTATGTGGAACTTTCCTCAAGTAAGAGTATTGATGCTAAGATGTACAGGCACTATGCTTGGAGAAGAAGGACAATAATGTATGCCTGTCTAATTTTCAGGACATCCACAAGCTGTCGTTTTATCTCTTTCAGATGTTAACTTATAACATAAAAGTGCTTATAAAGCAAAATAATATGTTTTAAAGCAAAATAACCAAAACAGCTGATTTTGATTCTTCGAAGCTTTTGATCTGAACTAATTCAATGTTTTACTTTCcactgttatactgtagttaattATGCATCAAATCGTGTACAAATGTCAGACTTTAAGTCAATTACAGTGATTATCATAAAGCCCCAAGTTTATCATGTTATTACAAATCCTATTGTACTTATGCTGATATTTTGAACTAGAACCAGTCAGTGCTTTTGATGGTTAGATTCTATTAGTATTCAGATTGCTGTTTCGTATTTGTCTTCTACATATTGTTGTTAGTGGATAGGATACATCTGCTTTTACAGTATTCAAGTGAACCACATCTGCATTTATACTGCTTTTTAGTTTTTCATTGAgtctatctatatattattaaaaaaatctgtctggaaatatcagcacgTATTGTCAATCTGTAATGAGCATAATACAATTGTTACGAATCACCAGTAGTGGATGTTATAGTACTTTAGATATTCATCCCATTTTATGTCTAATTAGTATTATTTTAAAGCACCAATTAATTAAACTCTATAATTCAGCAAGTGTATTTACAAATATTAATGTGACTGCAAGCTCCTGCTTTGAACAAAAGTCCATCCAATTTCTGGTAAGATTTCATACCACAACACAATCATCGACCCCTGCAGTTTGTTTGAGGGCAAAATAGGATTAAAATGTGGGTGGCTTTAATTTACTTTTCCAGGCCAAGAAAATGTGGGTTGGAGCCATTAATCACTGGAtatgtcaacaacaaaaataggatgttgtgtttgtgtggttggGGCACCGGCAGGAAGTTGGGTACCCAATTTTCACTCTCTAAAGTATTCTACCACATGTCATTTCAAACCATAAACATTGTATAAAACAACAGCAGTTTGGATTTCGTACTCTTATTGGTAACATTCGGTTAGTTTTAACCCACCGGGCAAAGACCTGACTTCAACATTAAATCAACATCCATATTTAGTTTTAACTATGTTTAATTAAACTTGATTTCACCTTGAAATGCTGTCATTGATTTGTGTTTGAAAAATAGGTAAAAATGttgacaaaacatttataaaaacattgATATTCGTTGTCAGGAATGTTAAAATAGGTATTTCATAGAAGGGCCTCTTATCCATCCTCAGTACATGTTACATTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCccttatccatcctcagttcaTGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACACGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGACCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACAGTGCTATGTGCAATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGGGAAAGGGCCCCTTATCCATCCTCAGTACATGTTACATTGCTATGTGCTTTTACTGTGATTTGGTAGAATATtgctttttgtgtttttcttgaTCTTTGCTAATAAAAATATAAACCAGT

Function

symbol description
dlk1 Is expressed in head.

NR:

description
protein delta homolog 1

GO: NA

KEGG:

id description
K24461 DLK1; protein delta homolog 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021574796.2 True 4122 mRNA 0.45 6 58034131 58040622
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110498394 NA coding upstream 146117 57857870 ~ 57888014 (+)
slc25a47b LOC106560560 coding upstream 203646 57826676 ~ 57830485 (+)
LOC110498171 rcan3 coding upstream 385860 57564277 ~ 57648271 (+)
nipal3 nipal3 coding upstream 470293 57554950 ~ 57563838 (+)
LOC110498392 LOC106612959 coding upstream 531378 57400757 ~ 57502753 (+)
dio3a dio3 coding downstream 69888 58110510 ~ 58111944 (+)
dync1h1 dync1h1 coding downstream 152357 58192979 ~ 58248705 (+)
LOC118941557 NA coding downstream 195173 58235795 ~ 58235866 (+)
LOC118941558 NA coding downstream 195627 58236249 ~ 58236320 (+)
LOC118941559 NA coding downstream 202704 58243326 ~ 58243397 (+)
G1642824 NA non-coding upstream 138853 57893885 ~ 57895278 (+)
G1642766 NA non-coding upstream 146793 57887124 ~ 57887338 (+)
G1642749 NA non-coding upstream 170044 57863518 ~ 57864087 (+)
G1642743 NA non-coding upstream 180952 57852857 ~ 57853179 (+)
G1642720 NA non-coding upstream 219519 57810114 ~ 57814612 (+)
G1642923 NA non-coding downstream 14282 58054904 ~ 58076331 (+)
G1642946 NA non-coding downstream 41104 58081726 ~ 58082116 (+)
G1642991 NA non-coding downstream 101183 58141805 ~ 58142036 (+)
G1642937 NA non-coding downstream 221750 58262372 ~ 58262955 (+)
G1643045 NA non-coding downstream 235955 58276577 ~ 58276929 (+)
G1642565 NA other upstream 351578 57656349 ~ 57682553 (+)
G1642062 NA other upstream 757354 57275053 ~ 57276777 (+)
G1641935 NA other upstream 890206 57135826 ~ 57143925 (+)
G1641713 LOC106560842 other upstream 1203822 56825952 ~ 56830309 (+)
G1641407 NA other upstream 1523034 56509929 ~ 56511097 (+)
G1642993 LOC106611338 other downstream 123855 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 252714 58293310 ~ 58298259 (+)
G1644123 NA other downstream 1013901 59054523 ~ 59057223 (+)
G1644280 NA other downstream 1156062 59196684 ~ 59197013 (+)
G1644569 NA other downstream 1567978 59608600 ~ 59609394 (+)

Expression

LOC110498180(dlk1) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 8.
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LOC110498180(dlk1) Expression in each Bioproject

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LOC110498180(dlk1) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network