fndc4b (LOC106604723)


Basic Information

Item Value
gene id fndc4b
gene name LOC106604723
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60358048 ~ 60375297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036955258.1
CTGTGGGTGAGGGAATTGTTTGCAATGTGATCTAGTGgcgaaggaggaggaggaggagagagagagagagagggggagaacatgCCTGCTGATGTTGCTGTCTCATTGAGCCTCGCTACCCTCCTGCTGACCACATGGAACACGCTGATGGTGACAGCCACAGTGCCAGTGGCTCCAGTCAACGTATCGGTAAGTCAGCTGAGATCAGACTCCGCCCTCATCATCTGGAGTGTACCACAGGGAGACATTGTCATCGGATACGTCATCTCACAACAGgtgactacctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggactACTACTGTGGAAAATCTcaaataggcagGATGGGCTGATGCAGCGCTCCATTCGGGAGGTGAACTCGTCAAGTCGAGCGTGTGTGTTGTGGGACCTGGATGAAGACACACACTACAGCGTacagGTCCAGTCCATAGGTCTTCAGGGAGACAGCCAGCCCAGTCACACTGTCCACTTCAGGACCCTGGAGAAGACTGATCACTACCCTATAGGAAGCATAGACGATGACCCGACCATGGAAGGGATGGATCTGACCCCTAACCTGCAGACAGGAGAACTACTCATCGTCACCACTGTACTGCTACTCTGGGcagcggtAATAGCTCTGTTCTGTCGTCAGTATGACATCATCAAGGACAATGACTACAAGGACAAACCCAAACGCCCCTCTGTTCGGACCGAACCATCTTACTACAGCACCAGCGTCTCGGCTCAGAGCACGCCACTCTACTACAATGGGGGGGTGCAAGGCAGCAAGGTGATAAACAAAGTTTTAATCTACAAGGATGTGTTTGTGTCATCAGTGTATAACTCAACTCTTCTCTCTGTCAGTTCCACaggacctcctcttcctcttccatcaTCAGAGTGTGACaggatctcctcctcctccatcatcaGTCTGTGACAgagcctcctcctcttcctcctccatcatcAGTCTGTGACAggatctcctcctcttcctccatcatcAGTCTGTGACAGgacctcctcatcctccttctccaTCATCAGTCTGTGACAggatctcctcctcttcctccatcatcAGTCTGTGACAaagcctcctcctccttctccatcaTCAGTCTGTGACaggatctcctcctcctcctcctccatcatcaGTCTGTG
>XM_036955260.1
CTGTGGGTGAGGGAATTGTTTGCAATGTGATCTAGTGgcgaaggaggaggaggaggagagagagagagagagggggagaacatgCCTGCTGATGTTGCTGTCTCATTGAGCCTCGCTACCCTCCTGCTGACCACATGGAACACGCTGATGGTGACAGCCACAGTGCCAGTGGCTCCAGTCAACGTATCGGTAAGTCAGCTGAGATCAGACTCCGCCCTCATCATCTGGAGTGTACCACAGGGAGACATTGTCATCGGATACGTCATCTCACAACAGgtgactacctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggactACTACTGTGGAAAATCTcaaataggcagGATGGGCTGATGCAGCGCTCCATTCGGGAGGTGAACTCGTCAAGTCGAGCGTGTGTGTTGTGGGACCTGGATGAAGACACACACTACAGCGTacagGTCCAGTCCATAGGTCTTCAGGGAGACAGCCAGCCCAGTCACACTGTCCACTTCAGGACCCTGGAGAAGACTGATCACTACCCTATAGGAAGCATAGACGATGACCCGACCATGGAAGGGATGGATCTGACCCCTAACCTGCAGACAGGAGAACTACTCATCGTCACCACTGTACTGCTACTCTGGGcagcggtAATAGCTCTGTTCTGTCGTCAGTATGACATCATCAAGGACAATGACTACAAGGACAAACCCAAACGCCCCTCTGTTCGGACCGAACCATCTTACTACAGCACCAGCGTCTCGGCTCAGAGCACGCCACTCTACTACAATGGGGGGGTGCAAGGCAGCAAGTTCCACaggacctcctcttcctcttccatcaTCAGAGTGTGACaggatctcctcctcctccatcatcaGTCTGTGACAgagcctcctcctcttcctcctccatcatcAGTCTGTGACAggatctcctcctcttcctccatcatcAGTCTGTGACAGgacctcctcatcctccttctccaTCATCAGTCTGTGACAggatctcctcctcttcctccatcatcAGTCTGTGACAaagcctcctcctccttctccatcaTCAGTCTGTGACaggatctcctcctcctcctcctccatcatcaGTCTGTG
>XM_036955259.1
ggaggaggaggaggagagagagagagagagggggagaacatgCCTGCTGATGTTGCTGTCTCATTGAGCCTCGCTACCCTCCTGCTGACCACATGGAACACGCTGATGGTGACAGCCACAGTGCCAGTGGCTCCAGTCAACGTATCGGTAAGTCAGCTGAGATCAGACTCCGCCCTCATCATCTGGAGTGTACCACAGGGAGACATTGTCATCGGATACGTCATCTCACAACAGaggcagGATGGGCTGATGCAGCGCTCCATTCGGGAGGTGAACTCGTCAAGTCGAGCGTGTGTGTTGTGGGACCTGGATGAAGACACACACTACAGCGTacagGTCCAGTCCATAGGTCTTCAGGGAGACAGCCAGCCCAGTCACACTGTCCACTTCAGGACCCTGGAGAAGACTGATCACTACCCTATAGGAAGCATAGACGATGACCCGACCATGGAAGGGATGGATCTGACCCCTAACCTGCAGACAGGAGAACTACTCATCGTCACCACTGTACTGCTACTCTGGGcagcggtAATAGCTCTGTTCTGTCGTCAGTATGACATCATCAAGGACAATGACTACAAGGACAAACCCAAACGCCCCTCTGTTCGGACCGAACCATCTTACTACAGCACCAGCGTCTCGGCTCAGAGCACGCCACTCTACTACAATGGGGGGGTGCAAGGCAGCAAGGTGATAAACAAAGTTTTAATCTACAAGGATGTGTTTGTGTCATCAGTGTATAACTCAACTCTTCTCTCTGTCAGTTCCACaggacctcctcttcctcttccatcaTCAGAGTGTGACaggatctcctcctcctccatcatcaGTCTGTGACAgagcctcctcctcttcctcctccatcatcAGTCTGTGACAggatctcctcctcttcctccatcatcAGTCTGTGACAGgacctcctcatcctccttctccaTCATCAGTCTGTGACAggatctcctcctcttcctccatcatcAGTCTGTGACAaagcctcctcctccttctccatcaTCAGTCTGTGACaggatctcctcctcctcctcctccatcatcaGTCTGTG

Function

NR:

description
fibronectin type III domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036955258.1 False 1204 mRNA 0.52 7 60358048 60375297
XM_036955260.1 False 1130 mRNA 0.53 8 60358048 60375297
XM_036955259.1 True 1070 mRNA 0.53 6 60358090 60375297

Neighbor

gene id symbol gene type direction distance location
LOC110498212 rp1l1 coding upstream 29437 60311459 ~ 60330337 (+)
LOC110498222 LOC106603387 coding upstream 335432 59996525 ~ 60022616 (+)
LOC110510484 LOC106607199 coding upstream 396331 59865592 ~ 59961717 (+)
ankef1b LOC106609265 coding upstream 518192 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 558461 59773968 ~ 59799587 (+)
LOC110498402 LOC106604468 coding downstream 7686 60382983 ~ 60392450 (+)
plaat1l LOC106611413 coding downstream 23563 60398860 ~ 60402461 (+)
LOC118941500 NA coding downstream 27162 60402459 ~ 60405097 (+)
chrna2a LOC103467111 coding downstream 87670 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 coding downstream 166658 60541955 ~ 60546243 (+)
G1645311 NA non-coding upstream 2065 60354607 ~ 60355983 (+)
G1645308 NA non-coding upstream 19379 60338166 ~ 60338669 (+)
G1645283 cssa01h8orf74 non-coding upstream 74835 60280553 ~ 60283213 (+)
G1645282 NA non-coding upstream 79199 60278615 ~ 60278849 (+)
G1645344 NA non-coding downstream 24210 60399507 ~ 60399947 (+)
G1645346 NA non-coding downstream 33920 60409217 ~ 60409527 (+)
G1645348 NA non-coding downstream 37920 60413217 ~ 60414578 (+)
G1645352 NA non-coding downstream 55023 60430320 ~ 60430826 (+)
G1645316 LOC106603693 non-coding downstream 102671 60477968 ~ 60534329 (+)
G1644651 NA other upstream 609703 59747984 ~ 59748345 (+)
G1644569 NA other upstream 748654 59608600 ~ 59609394 (+)
G1644280 NA other upstream 1161035 59196684 ~ 59197013 (+)
G1644123 NA other upstream 1300825 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 2059813 58293310 ~ 58298259 (+)
G1645443 NA other downstream 340636 60715933 ~ 60718611 (+)

Expression


Co-expression Network