Item | Value |
---|---|
gene id | pcnx1 |
gene name | pcnx1 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048583.1 |
NCBI id | CM023237.2 |
chromosome length | 67237266 |
location | 63153353 ~ 63232158 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
pcnx1 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PCNX1 (pecanex 1). |
description |
---|
PREDICTED: pecanex-like protein 1 isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036955352.1 | False | 7614 | mRNA | 0.59 | 36 | 63153353 | 63232158 |
XR_005037831.1 | False | 7673 | mRNA | 0.59 | 36 | 63153353 | 63232158 |
XM_036955351.1 | True | 7813 | mRNA | 0.58 | 35 | 63153354 | 63232158 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
med6 | med6 | coding | upstream | 724 | 63141423 ~ 63152629 (+) |
map3k9 | map3k9 | coding | upstream | 50309 | 63050817 ~ 63103044 (+) |
LOC100136022 | NA | coding | upstream | 112447 | 62885583 ~ 63042917 (+) |
LOC110512290 | LOC106600942 | coding | upstream | 381397 | 62655733 ~ 62771956 (+) |
LOC110504278 | LOC102780996 | coding | upstream | 515227 | 62604904 ~ 62638126 (+) |
LOC110498282 | NA | coding | downstream | 16464 | 63248622 ~ 63287372 (+) |
LOC110498284 | chp1 | coding | downstream | 60411 | 63292569 ~ 63309243 (+) |
LOC118941523 | NA | coding | downstream | 77190 | 63309348 ~ 63310641 (+) |
LOC110498285 | NA | coding | downstream | 80717 | 63312561 ~ 63320421 (+) |
LOC110498286 | NA | coding | downstream | 107627 | 63339785 ~ 63346292 (+) |
G1647433 | NA | non-coding | upstream | 29229 | 63121767 ~ 63124124 (+) |
G1647431 | NA | non-coding | upstream | 36522 | 63115757 ~ 63116831 (+) |
G1647437 | NA | non-coding | upstream | 37706 | 63115079 ~ 63115647 (+) |
G1647411 | NA | non-coding | upstream | 76210 | 63075149 ~ 63077143 (+) |
G1647397 | NA | non-coding | upstream | 104634 | 63048226 ~ 63048719 (+) |
G1647419 | NA | non-coding | downstream | 1281 | 63233439 ~ 63235440 (+) |
G1647485 | NA | non-coding | downstream | 6483 | 63238641 ~ 63238900 (+) |
G1647487 | NA | non-coding | downstream | 10756 | 63242914 ~ 63243254 (+) |
G1647429 | NA | non-coding | downstream | 56666 | 63288824 ~ 63289248 (+) |
G1647442 | NA | non-coding | downstream | 63001 | 63295159 ~ 63296728 (+) |
G1647342 | NA | other | upstream | 134665 | 63016955 ~ 63018688 (+) |
srsf5a | LOC106611464 | other | upstream | 659634 | 62486921 ~ 62493719 (+) |
G1646509 | NA | other | upstream | 1008063 | 62144183 ~ 62145290 (+) |
G1646294 | NA | other | upstream | 1592269 | 61558041 ~ 61561084 (+) |
LOC110498409 | LOC106592792 | other | downstream | 159467 | 63380908 ~ 63414582 (+) |
G1648296 | NA | other | downstream | 896050 | 64128208 ~ 64129068 (+) |
G1648608 | NA | other | downstream | 1748206 | 64980364 ~ 64980943 (+) |
G1649268 | NA | other | downstream | 2229615 | 65461773 ~ 65463454 (+) |
G1649291 | NA | other | downstream | 2312219 | 65544377 ~ 65545055 (+) |