G1581846


Basic Information

Item Value
gene id G1581846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 116250 ~ 116484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1810593
ctgtgctttggcaaagtgggtggggttatatcctgcctgtttggccctgtccgggggtatcatcggatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctagggtcagtctgttatatctggagtacttctcctgtcttatccggtgtcctgtgtgaatttaagtatgctctatctaattctctctttct

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1810593 True 235 lncRNA 0.50 1 116250 116484

Neighbor

gene id symbol gene type direction distance location
LOC118941384 NA coding upstream 22591 88562 ~ 93659 (+)
LOC110516047 LOC106602219 coding upstream 44035 69812 ~ 72215 (+)
LOC118941385 LOC106610450 coding upstream 54059 60866 ~ 62191 (+)
LOC110516050 nar5 coding upstream 64431 48513 ~ 51819 (+)
LOC118941529 LOC106610451 coding upstream 74195 25625 ~ 42055 (+)
LOC118941381 LOC106602212 coding downstream 9266 125750 ~ 133616 (+)
LOC110534579 LOC106602208 coding downstream 630363 746847 ~ 763889 (+)
LOC118941386 LOC106602222 coding downstream 647513 763997 ~ 783076 (+)
LOC110518435 LOC106602206 coding downstream 667087 783571 ~ 794371 (+)
trnal-cag-27 NA coding downstream 680526 795780 ~ 797202 (+)
G1581849 LOC106602211 non-coding downstream 7340 123824 ~ 124486 (+)
G1581905 NA non-coding downstream 25868 142352 ~ 142974 (+)
G1581911 NA non-coding downstream 338460 454944 ~ 455227 (+)
G1581929 NA non-coding downstream 380155 496639 ~ 496861 (+)
G1581985 NA non-coding downstream 500025 616509 ~ 616743 (+)
G1582090 LOC106602215 other downstream 693761 810245 ~ 958446 (+)
LOC110510959 LOC106602231 other downstream 1445021 1400041 ~ 1564792 (+)
LOC118941396 LOC106602234 other downstream 1465607 1580873 ~ 1620973 (+)
G1583003 NA other downstream 2082444 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 2680619 2770293 ~ 2811692 (+)

Expression


Co-expression Network