G1582127


Basic Information

Item Value
gene id G1582127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 935206 ~ 935588 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1810959
tcatctgctgctgaacgacagcacatcatctgctgctgaacgacagcacatcatctgctgctgaaccacagcacatcatctgctgctgaacgacagcacatcatctgctgctgaacgacagcacatcatctgctgctgaacgacagcacatcatctgctgctgaacgacagcacatcatctgctgctgaacgacagcacatcatctgctgctgaacgacagcacatcatctgctgctgaaccacagcacatcatctgctgctgaaccacagcacatcatctgctgctgaacgacaacacatcatctgctgctgaacgacagcacatcatctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1810959 True 333 lncRNA 0.52 2 935206 935588

Neighbor

gene id symbol gene type direction distance location
LOC110515221 LOC106602215 coding upstream 8003 918885 ~ 927203 (+)
LOC110518152 NA coding upstream 34154 898552 ~ 901052 (+)
LOC110515399 LOC106602215 coding upstream 65597 868005 ~ 869609 (+)
LOC110514371 LOC106602218 coding upstream 77065 850675 ~ 858141 (+)
LOC110534574 LOC106602215 coding upstream 112652 820911 ~ 822554 (+)
LOC110534577 LOC106602215 coding downstream 13638 949226 ~ 960377 (+)
LOC110510679 NA coding downstream 71228 1006816 ~ 1009333 (+)
LOC118936295 LOC106610443 coding downstream 163295 1098883 ~ 1117505 (+)
LOC118941388 LOC106610446 coding downstream 227745 1163333 ~ 1166048 (+)
LOC110497265 LOC106610443 coding downstream 233853 1169441 ~ 1190154 (+)
G1582103 NA non-coding upstream 43619 843867 ~ 891587 (+)
G1582102 NA non-coding upstream 92224 842263 ~ 842982 (+)
G1582101 NA non-coding upstream 93073 840785 ~ 842133 (+)
trnal-cag-27 NA non-coding upstream 138004 795780 ~ 797202 (+)
G1582038 NA non-coding upstream 243572 691415 ~ 691634 (+)
G1582157 NA non-coding downstream 85473 1021061 ~ 1021393 (+)
G1582171 NA non-coding downstream 112540 1048128 ~ 1048635 (+)
G1582174 LOC106610441 non-coding downstream 120210 1055798 ~ 1056944 (+)
G1582177 NA non-coding downstream 128041 1063629 ~ 1063840 (+)
G1582180 NA non-coding downstream 131226 1066814 ~ 1067157 (+)
LOC110516050 nar5 other upstream 884015 48513 ~ 51819 (+)
LOC110510959 LOC106602231 other downstream 625917 1400041 ~ 1564792 (+)
LOC118941396 LOC106602234 other downstream 646503 1580873 ~ 1620973 (+)
G1583003 NA other downstream 1263340 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 1861515 2770293 ~ 2811692 (+)
G1583215 NA other downstream 1878286 2765199 ~ 2815294 (+)

Expression


Co-expression Network