G1582171


Basic Information

Item Value
gene id G1582171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 1048128 ~ 1048635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1811005
agagacagagagagagagagacagagagagagagagagagagagagacagacagacagacagagagacagagagacagagagagagagacagagagagacagagagagagagagagagagagagatggggattaaATCTGGGGCCTAATTTAaatgaagccactcctgtgaCGCATACGGCAGGTTGAGAATCAGATCTAGTGAACAGCATTAAACGTAGTGTTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1811005 True 228 lncRNA 0.47 2 1048128 1048635

Neighbor

gene id symbol gene type direction distance location
LOC110510679 NA coding upstream 38795 1006816 ~ 1009333 (+)
LOC110534577 LOC106602215 coding upstream 87751 949226 ~ 960377 (+)
LOC110515221 LOC106602215 coding upstream 120925 918885 ~ 927203 (+)
LOC110518152 NA coding upstream 147076 898552 ~ 901052 (+)
LOC110515399 LOC106602215 coding upstream 178519 868005 ~ 869609 (+)
LOC118936295 LOC106610443 coding downstream 50248 1098883 ~ 1117505 (+)
LOC118941388 LOC106610446 coding downstream 114698 1163333 ~ 1166048 (+)
LOC110497265 LOC106610443 coding downstream 120806 1169441 ~ 1190154 (+)
LOC118941389 LOC106597675 coding downstream 153898 1202533 ~ 1204035 (+)
LOC110534781 LOC106610446 coding downstream 196235 1244870 ~ 1247840 (+)
G1582157 NA non-coding upstream 26735 1021061 ~ 1021393 (+)
G1582117 NA non-coding upstream 49155 891087 ~ 998973 (+)
G1582127 NA non-coding upstream 112540 935206 ~ 935588 (+)
G1582103 NA non-coding upstream 156541 843867 ~ 891587 (+)
G1582102 NA non-coding upstream 205146 842263 ~ 842982 (+)
G1582174 LOC106610441 non-coding downstream 7163 1055798 ~ 1056944 (+)
G1582177 NA non-coding downstream 14994 1063629 ~ 1063840 (+)
G1582180 NA non-coding downstream 18179 1066814 ~ 1067157 (+)
G1582192 NA non-coding downstream 23409 1072044 ~ 1072265 (+)
G1582193 NA non-coding downstream 24708 1073343 ~ 1073576 (+)
G1582090 LOC106602215 other upstream 89682 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 996937 48513 ~ 51819 (+)
LOC110510959 LOC106602231 other downstream 512870 1400041 ~ 1564792 (+)
LOC118941396 LOC106602234 other downstream 533456 1580873 ~ 1620973 (+)
G1583003 NA other downstream 1150293 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 1748468 2770293 ~ 2811692 (+)
G1583215 NA other downstream 1765239 2765199 ~ 2815294 (+)

Expression


Co-expression Network