G1582805


Basic Information

Item Value
gene id G1582805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 1726610 ~ 1755116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1811787
aggttctaccaagatttgaactcggatcactggattcaaagtccagagtgctaaccattacaccatagaaccatattctaaatccacatggaaattgaaaaaaaaaaaatctgtgtttaattagcaacagtggactgtcgttccttcacgtgttgcaaatactttcaactgacaacaatatttggacagctatattctagttccacgaggcaaattaattgacatggtaggatcgtccaagatttaaactcggattttcggattcagagtcctgagtgatatcctttacagcatagaaccctgtactcaatactctgtgacgggttcagattttactgtccttggttcaccggaaaaacagatcaaatattgtctggccagaaacggtatcaactaccaggcactcatagtatgcatttaccgtaggctagccattcgtgcgtaacaagagtgcttatcgactcccacccacttgtttctttcactcacaactattttaaagttgacaagggtgtgtcactgcaaaatcaaggtaggtcctaccgagatttgaactcagatcgcaggattcagagtcctgagtgctaaccattacaccatagaaccctatacagagtaattactgtagacttccgattttcctgtcatttgtacaccggataaacagcagattatgagattattgtttggccatgtgaataattcagcacaaaaaaataggaaggttctaccgagatttgaactcggatcactggattcaaagtccagagtgctaaccattacaccatagaaccatattctaaatccacatggaaattgaaaaaaaaaaaatctgtgtttaattagcaacagtggactgtcgttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1811787 True 866 lncRNA 0.39 2 1726610 1755116

Neighbor

gene id symbol gene type direction distance location
trnae-cuc-281 NA coding upstream 10521 1716018 ~ 1716089 (+)
trnae-cuc-280 NA coding upstream 10702 1715837 ~ 1715908 (+)
trnae-cuc-279 NA coding upstream 10884 1715655 ~ 1715726 (+)
trnae-cuc-278 NA coding upstream 12907 1713632 ~ 1713703 (+)
trnae-cuc-277 NA coding upstream 13088 1713452 ~ 1713522 (+)
trnaq-cug-118 NA coding downstream 64785 1819901 ~ 1819972 (+)
LOC118941531 LOC105006014 coding downstream 75428 1830544 ~ 1849336 (+)
LOC110497256 NA coding downstream 120516 1875632 ~ 1876316 (+)
LOC118941409 NA coding downstream 399455 1942489 ~ 2163262 (+)
LOC118941408 NA coding downstream 981970 2737086 ~ 2770154 (+)
G1582802 NA non-coding upstream 60097 1666242 ~ 1666513 (+)
G1582794 NA non-coding upstream 69782 1628276 ~ 1656828 (+)
G1582793 NA non-coding upstream 103363 1622980 ~ 1623247 (+)
G1582403 NA non-coding upstream 111990 1614346 ~ 1614620 (+)
G1582402 NA non-coding upstream 115139 1610943 ~ 1611471 (+)
G1582835 NA non-coding downstream 31791 1786907 ~ 1789412 (+)
G1582838 NA non-coding downstream 49736 1804852 ~ 1813655 (+)
G1582839 NA non-coding downstream 50252 1805368 ~ 1809283 (+)
G1582897 NA non-coding downstream 74992 1830108 ~ 1830465 (+)
G1582931 NA non-coding downstream 105492 1860608 ~ 1860954 (+)
LOC118941396 LOC106602234 other upstream 124877 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 161941 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 768164 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 1675419 48513 ~ 51819 (+)
G1583003 NA other downstream 443812 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 1041987 2770293 ~ 2811692 (+)
G1583215 NA other downstream 1058758 2765199 ~ 2815294 (+)
LOC118941397 LOC106601386 other downstream 1133910 2888963 ~ 3003056 (+)
LOC110517772 LOC106610548 other downstream 1277403 3032473 ~ 3091701 (+)

Expression


Co-expression Network