G1582839


Basic Information

Item Value
gene id G1582839
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 1805368 ~ 1809283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1811829
attttaaagttgacaagggaggagtgtgtcactgcaaaatcaaggtaggtcctaccgagatttgaactcggatcgcaggattcagagtcctgagtgctaaccattacaccatagaaccctatacagagtaattattgtagacttctgattttcctgtcatttgtacaccggataaacagcagattatgagattattgtttggccatgtgaataattcagcacaaaaaataggaaggttctaccgagatttgaactcggatcactggattcaaagtccagagtgctaaccattacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1811829 True 296 lncRNA 0.40 2 1805368 1809283

Neighbor

gene id symbol gene type direction distance location
trnae-cuc-281 NA coding upstream 89279 1716018 ~ 1716089 (+)
trnae-cuc-280 NA coding upstream 89460 1715837 ~ 1715908 (+)
trnae-cuc-279 NA coding upstream 89642 1715655 ~ 1715726 (+)
trnae-cuc-278 NA coding upstream 91665 1713632 ~ 1713703 (+)
trnae-cuc-277 NA coding upstream 91846 1713452 ~ 1713522 (+)
trnaq-cug-118 NA coding downstream 10618 1819901 ~ 1819972 (+)
LOC118941531 LOC105006014 coding downstream 21261 1830544 ~ 1849336 (+)
LOC110497256 NA coding downstream 66349 1875632 ~ 1876316 (+)
LOC118941409 NA coding downstream 345288 1942489 ~ 2163262 (+)
LOC118941408 NA coding downstream 927803 2737086 ~ 2770154 (+)
G1582835 NA non-coding upstream 15956 1786907 ~ 1789412 (+)
G1582807 NA non-coding upstream 26381 1722810 ~ 1778987 (+)
G1582823 NA non-coding upstream 40597 1748416 ~ 1764771 (+)
G1582805 NA non-coding upstream 50252 1726610 ~ 1755116 (+)
G1582802 NA non-coding upstream 138855 1666242 ~ 1666513 (+)
G1582897 NA non-coding downstream 20825 1830108 ~ 1830465 (+)
G1582931 NA non-coding downstream 51325 1860608 ~ 1860954 (+)
G1582936 NA non-coding downstream 64827 1874110 ~ 1875305 (+)
G1582937 NA non-coding downstream 69810 1879093 ~ 1880392 (+)
G1582939 NA non-coding downstream 75998 1885281 ~ 1887593 (+)
LOC118941396 LOC106602234 other upstream 203635 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 240699 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 846922 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 1754177 48513 ~ 51819 (+)
G1583003 NA other downstream 389645 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 987820 2770293 ~ 2811692 (+)
G1583215 NA other downstream 1004591 2765199 ~ 2815294 (+)
LOC118941397 LOC106601386 other downstream 1079743 2888963 ~ 3003056 (+)
LOC110517772 LOC106610548 other downstream 1223236 3032473 ~ 3091701 (+)

Expression


Co-expression Network