G1582990


Basic Information

Item Value
gene id G1582990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 1964496 ~ 1988413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812027
ggagaaagggaggagtcagaggaagagagaggcagaggttaaatGAACATCAACATGACCTTTCATGATGTGATGTGGAAGACAGGCTTATCGTTGGTATGGTGAAACAACACCCAtgtgtacatacactatatatacaaaagtatgtggacaccccttcaaattagtggattctatttcagccacaccccttcctgacagatgtataaaatcaagcactcagccatgcaatctccatagacaaacattgtcagtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812027 True 257 lncRNA 0.42 2 1964496 1988413

Neighbor

gene id symbol gene type direction distance location
LOC110497256 NA coding upstream 88180 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 115160 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 144524 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 248407 1716018 ~ 1716089 (+)
trnae-cuc-280 NA coding upstream 248588 1715837 ~ 1715908 (+)
LOC118941409 NA coding downstream 166158 1942489 ~ 2163262 (+)
LOC118941408 NA coding downstream 748673 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 781880 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 900550 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 918404 2906817 ~ 2909482 (+)
G1582950 NA non-coding upstream 38176 1913151 ~ 1926320 (+)
G1582952 NA non-coding upstream 44413 1915215 ~ 1920083 (+)
G1582944 NA non-coding upstream 63749 1900482 ~ 1900747 (+)
G1582939 NA non-coding upstream 76903 1885281 ~ 1887593 (+)
G1582937 NA non-coding upstream 84104 1879093 ~ 1880392 (+)
G1583006 LOC106566139 non-coding downstream 20879 2009292 ~ 2197896 (+)
G1583008 LOC106592562 non-coding downstream 24251 2012664 ~ 2205600 (+)
G1583012 NA non-coding downstream 27500 2015913 ~ 2403292 (+)
G1583022 NA non-coding downstream 67863 2056276 ~ 2058809 (+)
G1583027 NA non-coding downstream 90863 2079276 ~ 2451747 (+)
LOC118941396 LOC106602234 other upstream 362763 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 399827 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1006050 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 1913305 48513 ~ 51819 (+)
G1583003 NA other downstream 210515 2198928 ~ 2200873 (+)
G1583215 NA other downstream 825461 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 1044106 3032473 ~ 3091701 (+)

Expression


Co-expression Network