G1583022


Basic Information

Item Value
gene id G1583022
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2056276 ~ 2058809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812078
catccccaactcagattactatactatacaacacacatccccaactcagattactatacaacacagatccccaactcagattactatactatacaacacacatccccatctcagattactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattacaatacaacacacATCCCacactcagattactatactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactatacaacacacatcctcaactcagattactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactctacaacacacatccccaactcagattactacactatacaacacacatccccaactcagcttactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactacactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatacaacacacatccccaactcagattactatactatacaacacacatccccaactcagattactctacaacacacatccccaactcagattagtacactatacaacacacatccccaactcagattaccatactatacaacacacatccccaactcagcttactatactatacaaaacacatccccaactcagattactatacaacacacatccccaactcagattactatac

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812078 True 1224 lncRNA 0.39 3 2056276 2058809

Neighbor

gene id symbol gene type direction distance location
LOC110497256 NA coding upstream 179960 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 206940 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 236304 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 340187 1716018 ~ 1716089 (+)
trnae-cuc-280 NA coding upstream 340368 1715837 ~ 1715908 (+)
LOC118941409 NA coding downstream 95762 1942489 ~ 2163262 (+)
LOC118941408 NA coding downstream 678277 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 711484 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 830154 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 848008 2906817 ~ 2909482 (+)
G1582990 NA non-coding upstream 67863 1964496 ~ 1988413 (+)
G1582950 NA non-coding upstream 129956 1913151 ~ 1926320 (+)
G1582952 NA non-coding upstream 136193 1915215 ~ 1920083 (+)
G1582944 NA non-coding upstream 155529 1900482 ~ 1900747 (+)
G1582939 NA non-coding upstream 168683 1885281 ~ 1887593 (+)
G1583027 NA non-coding downstream 20467 2079276 ~ 2451747 (+)
G1583048 NA non-coding downstream 36440 2095249 ~ 2252487 (+)
G1583053 NA non-coding downstream 46172 2104981 ~ 2299760 (+)
G1583056 NA non-coding downstream 64542 2123351 ~ 2123928 (+)
G1583066 NA non-coding downstream 88460 2147269 ~ 2243694 (+)
LOC118941396 LOC106602234 other upstream 454543 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 491607 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1097830 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2005085 48513 ~ 51819 (+)
G1583003 NA other downstream 140119 2198928 ~ 2200873 (+)
G1583215 NA other downstream 755065 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 973710 3032473 ~ 3091701 (+)

Expression


Co-expression Network