G1583066


Basic Information

Item Value
gene id G1583066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2147269 ~ 2243694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812152
ccagcttgttattgttgttgttgtcatggttgtcctgttgggtagcaacttcaccagcttgttgttgttgttgtcatggttgtcctgttgggtagcaacttcaccagcttcttgttgttgttgtcatggttgttcctgttgggtagcAACTTCACCAGCTTGTGGTTCTTGTCATCGTCGTCAGGGTTGTTCCTGTTtggtagcaacttcaccagcttcttgttgttgttattctgaaGCATCTTGTGTGATGTTGGTCttgaggggagagggtgagagaagatGGATTCTATTCATATGCTGTCCAGCTTCTGAAGAACGTATGgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812152 True 328 lncRNA 0.45 3 2147269 2243694

Neighbor

gene id symbol gene type direction distance location
LOC110497256 NA coding upstream 270953 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 297933 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 327297 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 431180 1716018 ~ 1716089 (+)
trnae-cuc-280 NA coding upstream 431361 1715837 ~ 1715908 (+)
LOC118941408 NA coding downstream 493392 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 526599 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 645269 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 663123 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 756128 2951647 ~ 3001920 (+)
G1583056 NA non-coding upstream 23341 2123351 ~ 2123928 (+)
G1583022 NA non-coding upstream 88460 2056276 ~ 2058809 (+)
G1582990 NA non-coding upstream 158856 1964496 ~ 1988413 (+)
G1582950 NA non-coding upstream 220949 1913151 ~ 1926320 (+)
G1582952 NA non-coding upstream 227186 1915215 ~ 1920083 (+)
G1583101 LOC106594044 non-coding downstream 8549 2252243 ~ 2279420 (+)
G1583103 NA non-coding downstream 15156 2258850 ~ 2524584 (+)
G1583106 NA non-coding downstream 24814 2268508 ~ 2271352 (+)
G1583025 NA non-coding downstream 45192 2288886 ~ 2639348 (+)
G1583105 NA non-coding downstream 49091 2292785 ~ 2293202 (+)
LOC118941396 LOC106602234 other upstream 545536 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 582600 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1188823 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2096078 48513 ~ 51819 (+)
G1583215 NA other downstream 570180 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 788825 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 1189022 3416203 ~ 3445744 (+)

Expression


Co-expression Network