G1583003


Basic Information

Item Value
gene id G1583003
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2198928 ~ 2200873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812046
AGTTGATTATCATATTAAGTCGTTCAAAGAGAAGCATGTGTTGATTTATTCGTGTTTAATGAGTGATAATTTAAAACAAACtttagacccactacatatttacattgaaccatagttctgacatggatcatttagacccactacatatttacattgaaccatagttctgacatggatcattttgacccactacatatttacattgaaccatagttctgacatggatcattttgacccactatatatttacattgaaccatagttctgacagggatcatttagacccactacatatttacattgaaccatagttctgacatggatcattttgaccccagaggCATATATTTTATCACAGCCAAAATGTGGTTCATTCAATTCATCCAATGTTTCATGACTTTGTAAATCAACTTGTTCTTAATACATCTAAATCCTGGTTTAGTGTTTCTGTATCAATAAGgacttttaacaaattaaaatccTTTGGAGTCATTTTGACTCCATCCAAAATCACCTTTGATAAATAAGACgtttatttcaaatcaaaatcacattttattggtcacatacacgtgtttagcaaatgttattgcaggtgtagcaaaatgcttgtgtttctagctccggcagtgcagtaatacctaacaagtaatatctaataatTTCACAAATCTAAGTATTTGAATGTAGGTTTCTCTGTAGACATGATCCATCccaccagagggtggaggggcACCTGTATCAGTGGTTTTGACCAGATAGACACCTGCAGACACACAGTATAGTGCCTCCCATGTTCTCTCCTAAGATTGGACTTTCTATACCACGTATCACCTGACTGTGTACAAAACTGCCAATGATAGAAACTTCTTCCAGTGGTATACAGTGTATtcattaagtattcagaccccttcacttattccacatttagttacattacagcttcattctaaaattgaatatgtttttcccctcatcaaccgacacacaataccccataataacaaaccaaaaacaggcttgaaatttttgcaaatgtatttacttaagtattcagaccctttgctatgagactccaaattgaactcagatgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcaataaattagacatggtttggaaaggcacacacctgtctatataaggtcccacagttcacagtgcatgtcagagcaaaaaccaagccacgaggtcaaaggaattgtcggtagagttctgagacaggaatgtgtcgaagcacagatctgtggaaaggtaccaaaaatgtctgtagcattgacGGTCCCCATGAACACAatggccgccatcattcttaaatggaagaagtttggaaccaccaatactctttctagagctggccacctggccaaactgagaaatcgggggagaagggccttggtcagggaggtgaacaagaacccgatgttcactctgacagagctccagatttcctctgtggagactggagaaccttccagaaggacaaccatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812046 True 1554 TUCP 0.38 2 2198928 2200873

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 35666 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 322612 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 349592 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 378956 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 482839 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 536213 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 569420 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 688090 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 705944 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 798949 2951647 ~ 3001920 (+)
G1583006 LOC106566139 non-coding upstream 1032 2009292 ~ 2197896 (+)
G1583079 NA non-coding upstream 2231 2194734 ~ 2196697 (+)
G1583056 NA non-coding upstream 75000 2123351 ~ 2123928 (+)
G1583022 NA non-coding upstream 140119 2056276 ~ 2058809 (+)
G1583081 NA non-coding downstream 10223 2211096 ~ 2211581 (+)
G1583083 NA non-coding downstream 17125 2217998 ~ 2218867 (+)
G1583036 NA non-coding downstream 20606 2221479 ~ 2222264 (+)
G1583086 NA non-coding downstream 23292 2224165 ~ 2225229 (+)
G1583087 LOC106601384 non-coding downstream 24700 2225573 ~ 2251418 (+)
LOC118941396 LOC106602234 other upstream 597195 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 634259 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1240482 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2147737 48513 ~ 51819 (+)
G1583215 NA other downstream 613001 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 831646 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 1231843 3416203 ~ 3445744 (+)

Expression


Co-expression Network