G1583081


Basic Information

Item Value
gene id G1583081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2211096 ~ 2211581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812170
tctcatagctgtgatcaatgtgacaagagatactctgataaaagatctctgatcaaacatcagaaaatacattaatgatggagttgtttcatgatatcaatgaattaatgtcacaatgtagaatgttttaacattgtagtaggagtattttaatgatgtcacaatgtagaatgttttaacattgtagaaggagtattttaatgatgtcacaatgtagaatgttttcacattgtagaaggagtattttaatgatgtcacaatgtagaatgttttcacattgtagtaggagtattttaatgatgtcacaatgtagaatgttttaacattgtagtaggagtattttaatgatgtcacaatgtagaatgttttaacattgtagaaggagtattttaatgatgtcacaatgtagaatgttttcacattgtagaaggagtattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812170 True 438 lncRNA 0.29 2 2211096 2211581

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 47834 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 334780 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 361760 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 391124 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 495007 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 525505 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 558712 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 677382 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 695236 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 788241 2951647 ~ 3001920 (+)
G1583008 LOC106592562 non-coding upstream 5496 2012664 ~ 2205600 (+)
G1583006 LOC106566139 non-coding upstream 13200 2009292 ~ 2197896 (+)
G1583079 NA non-coding upstream 14399 2194734 ~ 2196697 (+)
G1583056 NA non-coding upstream 87168 2123351 ~ 2123928 (+)
G1583083 NA non-coding downstream 6417 2217998 ~ 2218867 (+)
G1583036 NA non-coding downstream 9898 2221479 ~ 2222264 (+)
G1583086 NA non-coding downstream 12584 2224165 ~ 2225229 (+)
G1583087 LOC106601384 non-coding downstream 13992 2225573 ~ 2251418 (+)
G1583088 NA non-coding downstream 14321 2225902 ~ 2227946 (+)
G1583003 NA other upstream 10223 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 609363 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 646427 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1252650 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2159905 48513 ~ 51819 (+)
G1583215 NA other downstream 602293 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 820938 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 1221135 3416203 ~ 3445744 (+)

Expression


Co-expression Network