XLOC_003518


Basic Information

Item Value
gene id XLOC_003518
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 28662904 ~ 28663396 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008405
attttagattaagttaaatgaaaataaatattttcaagtttttaaatgttaattccatataatgtttattttatattacgaCAATGATCATTCATTTTATGAGTTTAGTAATTGAAACTAAAATAACCCTGATTGATCTTGATTATCCAAAATATTAGTATTTGTGCATCCCTTAGAAATTCAGTACATTGAACAATGGCATCttaacacattaaaaacatttataaattgtaCAAACCCattaaaaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaattaatcaatcaatcaaatcaatcaatcaaatcaaatcaaatcaatcaatcaatcaatacctttccttttgaaaaaaaaaacagaacagaaaacagaaaaaataaacattgtaccaACTCATCAAGTCATGTTTATAAATCATTGCAACGAAATAAGAAGATGTTTAAGCATTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008405 True 493 lncRNA 0.23 1 28662904 28663396

Neighbor

gene id symbol gene type direction distance location
XLOC_003517 NA coding upstream 19204 28637462 ~ 28643700 (+)
XLOC_003516 si:ch211-226m7.4 coding upstream 31562 28620683 ~ 28631342 (+)
XLOC_003515 aadacl4 coding upstream 43093 28617564 ~ 28619811 (+)
XLOC_003514 NA coding upstream 45945 28533224 ~ 28616959 (+)
XLOC_003513 BX649345.2 coding upstream 142140 28517562 ~ 28520764 (+)
XLOC_003519 NA coding downstream 133871 28797267 ~ 28836699 (+)
XLOC_003520 NA coding downstream 544490 29207886 ~ 29208193 (+)
XLOC_003521 CR450796.1 coding downstream 688705 29352101 ~ 29352221 (+)
XLOC_003522 wu:fi42e03 coding downstream 874360 29537756 ~ 29540033 (+)
XLOC_003523 BX548000.1 coding downstream 903350 29566746 ~ 29571528 (+)
XLOC_003369 CR854846.2 misc upstream 12539822 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 15950908 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 15968641 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 15977305 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 15982876 12679732 ~ 12680028 (+)
XLOC_003511 CR450786.1 non-coding upstream 215471 28442373 ~ 28447433 (+)
XLOC_003507 BX601648.2 non-coding upstream 918622 27738489 ~ 27744282 (+)
XLOC_003524 NA non-coding downstream 927477 29590873 ~ 29591196 (+)

Expression


Co-expression Network