G1583118


Basic Information

Item Value
gene id G1583118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2333660 ~ 2334105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812223
GGGTTTAGAATGGTTTGTATGGACACATGAATTTCTCCAtgtgggataataaagttgactaatattgaactgctataatcactgtagatttatactctacctacctggtggactgacactttgagcctggagatctgaggagaaagagagagacagaggagaaagagagagaaagaaaggagaaagggaggagtcagaggaagagagagacagaggttaaatGAACATCAACATGACCTTTCATGATGTGATGGGGAAGACAGGCTTATCGTTGGTATGGTGCAACAACACCCAtgtgtacatacactatatatacaaaagtatgtggacaccccttcaaatgagtggattctctttcagccacaccccttcctgacagatgtataaaatcaagcactcagccatgcaatctccatagacaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812223 True 424 lncRNA 0.42 2 2333660 2334105

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 170398 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 457344 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 484324 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 513688 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 617571 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 402981 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 436188 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 554858 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 572712 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 665717 2951647 ~ 3001920 (+)
G1583053 NA non-coding upstream 33900 2104981 ~ 2299760 (+)
G1583077 NA non-coding upstream 36095 2185572 ~ 2297565 (+)
G1583105 NA non-coding upstream 40458 2292785 ~ 2293202 (+)
G1583101 LOC106594044 non-coding upstream 54240 2252243 ~ 2279420 (+)
G1583106 NA non-coding upstream 62308 2268508 ~ 2271352 (+)
G1583120 NA non-coding downstream 17540 2351645 ~ 2704430 (+)
G1583005 LOC106592562 non-coding downstream 67824 2401929 ~ 2619707 (+)
G1583136 NA non-coding downstream 81173 2415278 ~ 2477530 (+)
G1583137 NA non-coding downstream 83997 2418102 ~ 2467141 (+)
G1583034 NA non-coding downstream 96100 2430205 ~ 2457580 (+)
G1583003 NA other upstream 132787 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 731927 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 768991 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1375214 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2282469 48513 ~ 51819 (+)
G1583215 NA other downstream 479769 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 698414 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 1098611 3416203 ~ 3445744 (+)

Expression


Co-expression Network