G1583120


Basic Information

Item Value
gene id G1583120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2351645 ~ 2704430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812227
atgtagattgttttaacattgtagtaggagtattttaatgatgtcacaatgtagaatgttttaacattgtagtaggagtattttaatgatgtcacagtgtagaatgttttaacattgttgTTGGAGTACAAAggattttaatttgttaaaagtcCATATTGATACAGAAACACTAAACCAGGATTTAGATGTATTAAGAACAAGTTGATTGACAAAGTCATGAAAAATGGAATAAACCACATTTTGGCTGTGATAAAAGATATGcctctggggtcaaaatgatccatgtcagaactatggttcaatgtaaatatgtagtgggtcaaaatgatccatgtcagaactatggttcaatgtaaatatgtagtgggtcaaaatgatccatgtcagaactatggttgaatgtaaatatgtagtgggtctaaaGTTTGTTTTAAATTATCACTCATTAAACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812227 True 456 lncRNA 0.31 2 2351645 2704430

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 188383 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 475329 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 502309 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 531673 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 635556 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 32656 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 65863 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 184533 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 202387 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 295392 2951647 ~ 3001920 (+)
G1583118 NA non-coding upstream 17540 2333660 ~ 2334105 (+)
G1583053 NA non-coding upstream 51885 2104981 ~ 2299760 (+)
G1583077 NA non-coding upstream 54080 2185572 ~ 2297565 (+)
G1583105 NA non-coding upstream 58443 2292785 ~ 2293202 (+)
G1583101 LOC106594044 non-coding upstream 72225 2252243 ~ 2279420 (+)
G1583039 NA non-coding downstream 1551 2705981 ~ 2734147 (+)
G1583212 NA non-coding downstream 25401 2729831 ~ 2730727 (+)
G1583230 NA non-coding downstream 53416 2757846 ~ 2758239 (+)
G1583215 NA non-coding downstream 60769 2765199 ~ 2815294 (+)
G1583235 NA non-coding downstream 62483 2766913 ~ 2767609 (+)
G1583003 NA other upstream 150772 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 749912 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 786976 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1393199 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2300454 48513 ~ 51819 (+)
LOC110517772 LOC106610548 other downstream 328089 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 728286 3416203 ~ 3445744 (+)

Expression


Co-expression Network