G1583034


Basic Information

Item Value
gene id G1583034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2430205 ~ 2457580 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812105
TGCGTTAGCTAAGTTTTCATGTCATCGGGTGTAGTTCATAAAGGTTGAAGAGTGTATGTTAGGATGAAGTGTGAATTCATGCCAGGACTAATAAGTGTGAAGTTTGATTTCCTCCCTTCTGTAATAAGCAGCCGTATTTTTTCAAGAGGTATTTTCtcctttattcatgtgtttaatctGAACCCGTTATAACGCCGGTTAAACTGTTATGTATGTAATCACTTCAGAGTTATACCAAGCTAATAAGTCACTCGTAAGATAAGGTTGTAAGAGTGTGCTTAACTGTATTTTTCATTTACTTTATAGTTCTCACGGAAGgtgataattctgactaaaactacagaatAAAGCCGCCAGTTAAAATCAAGGAACGGTTGTGCTCGTGGTTACTGAAGGGAGCTACACAATGTAATGTTCAGGTTGACAATATCAATGGAATAGACCAAagcagagccatgtatttagatATGAACAGATATCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812105 True 483 lncRNA 0.37 2 2430205 2457580

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 266943 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 553889 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 580869 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 610233 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 714116 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 279506 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 312713 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 431383 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 449237 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 542242 2951647 ~ 3001920 (+)
G1583012 NA non-coding upstream 26913 2015913 ~ 2403292 (+)
G1583118 NA non-coding upstream 96100 2333660 ~ 2334105 (+)
G1583053 NA non-coding upstream 130445 2104981 ~ 2299760 (+)
G1583077 NA non-coding upstream 132640 2185572 ~ 2297565 (+)
G1583105 NA non-coding upstream 137003 2292785 ~ 2293202 (+)
G1583151 NA non-coding downstream 7054 2464634 ~ 2465046 (+)
G1583041 LOC106594044 non-coding downstream 8245 2465825 ~ 2520479 (+)
G1583152 NA non-coding downstream 14995 2472575 ~ 2473613 (+)
G1583163 NA non-coding downstream 60542 2518122 ~ 2713339 (+)
G1583174 NA non-coding downstream 94576 2552156 ~ 2632600 (+)
G1583003 NA other upstream 229332 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 828472 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 865536 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1471759 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2379014 48513 ~ 51819 (+)
G1583215 NA other downstream 356294 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 574939 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 975136 3416203 ~ 3445744 (+)

Expression


Co-expression Network