G1583151


Basic Information

Item Value
gene id G1583151
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2464634 ~ 2465046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812269
taaaaagacagtgaatataacctgtatataacctctctactgtatataacctctctactgtatataacctctctactgtatataacctctctactgtatataacctctctactgtatatagcctctactgtatatagccactctactgtattttgcctctctactgtatataacctctctactgtatataacctctctactgtattttaCC

Function

NR:

description
PREDICTED: protein shisa-6 homolog isoform X10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812269 True 211 lncRNA 0.34 2 2464634 2465046

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 301372 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 588318 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 615298 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 644662 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 748545 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 272040 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 305247 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 423917 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 441771 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 534776 2951647 ~ 3001920 (+)
G1582984 NA non-coding upstream 1223 1944409 ~ 2463411 (+)
G1583037 NA non-coding upstream 5758 2308039 ~ 2458876 (+)
G1583034 NA non-coding upstream 7054 2430205 ~ 2457580 (+)
G1583147 NA non-coding upstream 9517 2454755 ~ 2455117 (+)
G1583027 NA non-coding upstream 12887 2079276 ~ 2451747 (+)
G1583041 LOC106594044 non-coding downstream 779 2465825 ~ 2520479 (+)
G1583152 NA non-coding downstream 7529 2472575 ~ 2473613 (+)
G1583163 NA non-coding downstream 53076 2518122 ~ 2713339 (+)
G1583174 NA non-coding downstream 87110 2552156 ~ 2632600 (+)
G1583182 NA non-coding downstream 147834 2612880 ~ 2885152 (+)
G1583003 NA other upstream 263761 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 862901 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 899965 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1506188 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2413443 48513 ~ 51819 (+)
G1583215 NA other downstream 348828 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 567473 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 967670 3416203 ~ 3445744 (+)

Expression


Co-expression Network